RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ITPRIPL1Q6GPH6 555 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 YAF2Q8IY57 180 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 GPRASP2Q96D09 838 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 C18orf8Q96DM3 657 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 GRIK1P39086 918 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 NCOA4Q13772 614 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 RDM1Q8NG50 284 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 TAAR1Q96RJ0 339 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 ANKEF1Q9NU02 776 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 NVLO15381 856 aaKnown RBP19.69■□□□□ 0.74
PCDH1-201ENST00000287008 SLC16A3O15427 465 aaKnown RBP19.69■□□□□ 0.74
PCDH1-201ENST00000287008 BAG2O95816 211 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 ICAM1P05362 532 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 HSD17B4P51659 736 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 BACE1P56817 501 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 EFCAB12Q6NXP0 572 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 EMBQ6PCB8 327 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 TADA2BQ86TJ2 420 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 CCDC197Q8NCU1 140 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 HPS3Q969F9 1004 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 LRGUKQ96M69 825 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 C7orf25Q9BPX7 421 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 HAUS8Q9BT25 410 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 MMTAG2Q9BU76 263 aaKnown RBP19.69■□□□□ 0.74
PCDH1-201ENST00000287008 CEP170BQ9Y4F5 1589 aaPredicted RBP19.69■□□□□ 0.74
PCDH1-201ENST00000287008 CDH6P55285 790 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 MORC4Q8TE76 937 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 RFFLQ8WZ73 363 aa19.69■□□□□ 0.74
PCDH1-201ENST00000287008 EVI5O60447 810 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 TROAPQ12815 778 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 SGSM1Q2NKQ1 1148 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 LRRC71Q8N4P6 559 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 DDX50Q9BQ39 737 aaKnown RBP19.68■□□□□ 0.74
PCDH1-201ENST00000287008 PARVAQ9NVD7 372 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 CACNB2Q08289 660 aaPredicted RBP19.68■□□□□ 0.74
PCDH1-201ENST00000287008 ARID5BQ14865 1188 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 SNRNP35Q16560 246 aaKnown RBP19.68■□□□□ 0.74
PCDH1-201ENST00000287008 CDC26Q8NHZ8 85 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 EPAS1Q99814 870 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 CYP26A1O43174 497 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 CYBBP04839 570 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 SERPINB6P35237 376 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 TTC23LQ6PF05 361 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 METTL16Q86W50 562 aaKnown RBP19.68■□□□□ 0.74
PCDH1-201ENST00000287008 DDX56Q9NY93 547 aaKnown RBP19.68■□□□□ 0.74
PCDH1-201ENST00000287008 GLE1Q53GS7 698 aaKnown RBP19.68■□□□□ 0.74
PCDH1-201ENST00000287008 EXT2Q93063 718 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 FGD4Q96M96 766 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 USH1CQ9Y6N9 552 aa19.68■□□□□ 0.74
PCDH1-201ENST00000287008 LCP1P13796 627 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 ZFXP17010 805 aaPredicted RBP19.67■□□□□ 0.74
PCDH1-201ENST00000287008 TAC1P20366 129 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 CCT5P48643 541 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 NPEPPSP55786 919 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 ATF7IP2Q5U623 682 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 INO80Q9ULG1 1556 aaPredicted RBP19.67■□□□□ 0.74
PCDH1-201ENST00000287008 PCSK1P29120 753 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 ZNF235Q14590 738 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 C6orf118Q5T5N4 469 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 PARD6BQ9BYG5 372 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 CNOT10Q9H9A5 744 aaKnown RBP19.67■□□□□ 0.74
PCDH1-201ENST00000287008 WDR35Q9P2L0 1181 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 LSM7Q9UK45 103 aaKnown RBP19.67■□□□□ 0.74
PCDH1-201ENST00000287008 TTC7AQ9ULT0 858 aaPredicted RBP19.67■□□□□ 0.74
PCDH1-201ENST00000287008 NFU1Q9UMS0 254 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 NOVA2Q9UNW9 492 aaKnown RBP19.67■□□□□ 0.74
PCDH1-201ENST00000287008 MYMKA6NI61 221 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 ADCY2Q08462 1091 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 SRRM1Q8IYB3 904 aaKnown RBP19.67■□□□□ 0.74
PCDH1-201ENST00000287008 DYRK4Q9NR20 520 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 EHD2Q9NZN4 543 aa19.67■□□□□ 0.74
PCDH1-201ENST00000287008 IGSF9BQ9UPX0 1349 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 RHOBTB3O94955 611 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 ZNF211Q13398 564 aaPredicted RBP19.66■□□□□ 0.74
PCDH1-201ENST00000287008 EDRF1Q3B7T1 1238 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 CDKL3Q8IVW4 592 aaPredicted RBP19.66■□□□□ 0.74
PCDH1-201ENST00000287008 ADSSL1Q8N142 457 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 MROH8Q9H579 483 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 SENP2Q9HC62 589 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 PRAMEP78395 509 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 PLEKHH3Q7Z736 793 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 SEC31AO94979 1220 aaKnown RBP19.66■□□□□ 0.74
PCDH1-201ENST00000287008 SCP2P22307 547 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 NLRP11P59045 1033 aaKnown RBP19.66■□□□□ 0.74
PCDH1-201ENST00000287008 CAV1Q03135 178 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 PDXDC1Q6P996 788 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 AGPAT1Q99943 283 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 GAS2O43903 313 aaKnown RBP19.66■□□□□ 0.74
PCDH1-201ENST00000287008 ALS2CLQ60I27 953 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 TTC19Q6DKK2 380 aaPredicted RBP19.66■□□□□ 0.74
PCDH1-201ENST00000287008 WNT8AQ9H1J5 351 aa19.66■□□□□ 0.74
PCDH1-201ENST00000287008 IL18RAPO95256 599 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 ALDH1A1P00352 501 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 STK4Q13043 487 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 TXNRD3Q86VQ6 643 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 OR6P1Q8NGX9 317 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 APEX2Q9UBZ4 518 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 WDR91A4D1P6 747 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 PRRG1O14668 218 aa19.65■□□□□ 0.74
PCDH1-201ENST00000287008 DRP2Q13474 957 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms