RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 LDHAP00338 332 aaKnown RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 TPM2P07951 284 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 HOXA11P31270 313 aaPredicted RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 ATN1P54259 1190 aaPredicted RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 HSP90AA2PQ14568 343 aaPredicted RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 SNRNP35Q16560 246 aaKnown RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 MAN2A1Q16706 1144 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 ANKRD33Q7Z3H0 272 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 DRC7Q8IY82 874 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 CPB2Q96IY4 423 aa20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 NOC4LQ9BVI4 516 aaKnown RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 RTN4Q9NQC3 1192 aaKnown RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 NOC2LQ9Y3T9 749 aaKnown RBP20.62■□□□□ 0.89
PDLIM3-202ENST00000284770 N4BP3O15049 544 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 TPM3P06753 285 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 CKBP12277 381 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 AXLP30530 894 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 RBL2Q08999 1139 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 NOLC1Q14978 699 aaKnown RBP eCLIP20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 ZNF568Q3ZCX4 644 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 HS1BP3Q53T59 392 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 ZNF618Q5T7W0 954 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 EEF1DP3Q658K8 133 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 ZBTB33Q86T24 672 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 CBWD2Q8IUF1 395 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 PDZD7Q9H5P4 517 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 AGPAT5Q9NUQ2 364 aa20.61■□□□□ 0.89
PDLIM3-202ENST00000284770 PQBP1O60828 265 aaKnown RBP20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 PTMAP06454 111 aaKnown RBP20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 VWA3BQ502W6 1294 aa20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 MIIPQ5JXC2 388 aa20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 INTS8Q75QN2 995 aaKnown RBP20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 FAM228AQ86W67 206 aa20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 CDR2LQ86X02 465 aaPredicted RBP20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 VSTM4Q8IW00 320 aa20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 TRIM44Q96DX7 344 aaPredicted RBP20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 PAWRQ96IZ0 340 aaKnown RBP20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 TOX2Q96NM4 488 aa20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 FAM213AQ9BRX8 229 aa20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 C11orf49Q9H6J7 331 aa20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDLIM3-202ENST00000284770 TLR3O15455 904 aaKnown RBP20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 TEX33O43247 280 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 FAM189A1O60320 539 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 RPS6KA5O75582 802 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 NOTUMQ6P988 496 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 CDT1Q9H211 546 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 NDST4Q9H3R1 872 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 SQORQ9Y6N5 450 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 ZNF233A6NK53 670 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 LGALS16A8MUM7 142 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 GOLGA6L6A8MZA4 724 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 OGTO15294 1046 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 ADRB2P07550 413 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 MCF2P10911 925 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 HARSP12081 509 aaKnown RBP20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 KRT13P13646 458 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 ACOT2P49753 483 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 MCCD1P59942 119 aaPredicted RBP20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 FBXO47Q5MNV8 452 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 CRELD2Q6UXH1 353 aaPredicted RBP20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 CCDC155Q8N6L0 562 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 MFSD14AQ96MC6 490 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 ADPGKQ9BRR6 497 aa20.59■□□□□ 0.89
PDLIM3-202ENST00000284770 DCDC2CA8MYV0 355 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 PBX1P40424 430 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 BFSP1Q12934 665 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 BFSP2Q13515 415 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 TRAF7Q6Q0C0 670 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 TMC6Q7Z403 805 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 USP38Q8NB14 1042 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 SLC35C1Q96A29 364 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 IMPACTQ9P2X3 320 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 ST3GAL5Q9UNP4 418 aa20.58■□□□□ 0.89
PDLIM3-202ENST00000284770 PES1O00541 588 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 GPR182O15218 404 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 CYP24A1Q07973 514 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 PTPN21Q16825 1174 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 TRIM60Q495X7 471 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 ZBTB41Q5SVQ8 909 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 SLC27A1Q6PCB7 646 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 CCDC186Q7Z3E2 898 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 APBB1IPQ7Z5R6 666 aaPredicted RBP20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 NECAB2Q7Z6G3 386 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 PIN4Q9Y237 131 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 VAMP7P51809 220 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 UBXN1Q04323 297 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 TLE2Q04725 743 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 ENPEPQ07075 957 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 KCNH2Q12809 1159 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 DCAF17Q5H9S7 520 aaPredicted RBP20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 TCERG1LQ5VWI1 586 aa20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 AGO3Q9H9G7 860 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 CPSF3Q9UKF6 684 aaKnown RBP20.57■□□□□ 0.88
PDLIM3-202ENST00000284770 PITPNM1O00562 1244 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 GHRP10912 638 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 SELPP16109 830 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 FAAP100Q0VG06 881 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms