RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 SLFNL1Q499Z3 407 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 ZNF394Q53GI3 561 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 CCDC157Q569K6 752 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 TMA16Q96EY4 203 aaKnown RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 TUFT1Q9NNX1 390 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 GPS1Q13098 491 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 SLC27A3Q5K4L6 730 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 UNC45BQ8IWX7 931 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 SIK2Q9H0K1 926 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 CAPN10Q9HC96 672 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 LSM7Q9UK45 103 aaKnown RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 NDUFS3O75489 264 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 BTBD8Q5XKL5 378 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 FBXO31Q5XUX0 539 aaPredicted RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 CAPRIN2Q6IMN6 1127 aaKnown RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 MRPL39Q9NYK5 338 aaKnown RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 TTC7AQ9ULT0 858 aaPredicted RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 SEMA3EO15041 775 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 KIAA1586Q9HCI6 787 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 CLRN2A0PK11 232 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 CFAP73A6NFT4 308 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 ERN1O75460 977 aaKnown RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 AP1S2P56377 157 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 VSNL1P62760 191 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 ARL8AQ96BM9 186 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 COA7Q96BR5 231 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 TRPC7Q9HCX4 862 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 EMILIN3Q9NT22 766 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 BTBD18B2RXH4 712 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 F8W810 466 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 TALDO1P37837 337 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 ESRP1Q6NXG1 681 aaKnown RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 DHX36Q9H2U1 1008 aaKnown RBP13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 GDAQ9Y2T3 454 aa13.93□□□□□ -0.18
SMARCA5-201ENST00000283131 CDC25BP30305 580 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 PASD1Q8IV76 773 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 C19orf18Q8NEA5 215 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 ATXN7L3BQ96GX2 97 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 KRT6AP02538 564 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 KRT6BP04259 564 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 BMP3P12645 472 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 CCDC130P13994 396 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 KRT6CP48668 564 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 CCDC60Q8IWA6 550 aaPredicted RBP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 KCTD17Q8N5Z5 321 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 CNGB3Q9NQW8 809 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 PGM1P36871 562 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 GSTA3Q16772 222 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 ARMCX4Q5H9R4 360 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 MICALL2Q8IY33 904 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 MTIF3Q9H2K0 278 aaKnown RBP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 DDHD2O94830 711 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 MOCS2O96007 188 aaPredicted RBP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 MKRN3Q13064 507 aaKnown RBP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 CDKL3Q8IVW4 592 aaPredicted RBP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 WWP1Q9H0M0 922 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 VIPAS39Q9H9C1 493 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 APPL1Q9UKG1 709 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 ADGRF5Q8IZF2 1346 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 JAK1P23458 1154 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 RGS4P49798 205 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 RPS7P62081 194 aaKnown RBP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 MMRN1Q13201 1228 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 ATP11CQ8NB49 1132 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 CMTM5Q96DZ9 223 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 FOXP1Q9H334 677 aaPredicted RBP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 PEX3P56589 373 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 TMEM154Q6P9G4 183 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 SRLQ86TD4 932 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 GRAMD1AQ96CP6 724 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 CCDC134Q9H6E4 229 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 ETNK1Q9HBU6 452 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 HSPBP1Q9NZL4 362 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 CNOT8Q9UFF9 292 aaKnown RBP13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 ARL2BPQ9Y2Y0 163 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 PCDHGA4Q9Y5G9 962 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 NDUFB9Q9Y6M9 179 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 AATKQ6ZMQ8 1374 aa13.92□□□□□ -0.18
SMARCA5-201ENST00000283131 MIF4GDA9UHW6 222 aaKnown RBP13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 MAGEA9P43362 315 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 MRPS35P82673 323 aaKnown RBP13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 CCDC81Q6ZN84 652 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 HS6ST3Q8IZP7 471 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 CNPY4Q8N129 248 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 SHCBP1Q8NEM2 672 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 GPC3P51654 580 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 KRT31Q15323 416 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 ME3Q16798 604 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 ZBTB38Q8NAP3 1195 aaPredicted RBP13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 S100A9P06702 114 aaKnown RBP13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 CNTN1Q12860 1018 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 CASP8Q14790 479 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 RCN1Q15293 331 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 UBAP1Q9NZ09 502 aa13.91□□□□□ -0.18
SMARCA5-201ENST00000283131 PSMD3O43242 534 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms