RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 NOLC1Q14978 699 aaKnown RBP eCLIP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 LMBRD2Q68DH5 695 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 TAF2Q6P1X5 1199 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 MPZL3Q6UWV2 235 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 TSHZ1Q6ZSZ6 1077 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 INTS8Q75QN2 995 aaKnown RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 IFNLR1Q8IU57 520 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 NME8Q8N427 588 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 TMEM40Q8WWA1 233 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CELF4Q9BZC1 486 aaKnown RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 PDZD7Q9H5P4 517 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 PAK6Q9NQU5 681 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 RBAKQ9NYW8 714 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 STYXL1Q9Y6J8 313 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 TPM1P09493 284 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 ACTN1P12814 892 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CASP14P31944 242 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CRYBB1P53674 252 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CDC42EP1Q00587 391 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 PPP2R3AQ06190 1150 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 TBX2Q13207 712 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 SNX17Q15036 470 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CBWD6Q4V339 395 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CBWD3Q5JTY5 395 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CBWD5Q5RIA9 395 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CRELD2Q6UXH1 353 aaPredicted RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 SERINC5Q86VE9 423 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CEP120Q8N960 986 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CACTINQ8WUQ7 758 aaKnown RBP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 CDT1Q9H211 546 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 PHF24Q9UPV7 400 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 TRPV2Q9Y5S1 764 aa12.38□□□□□ -0.43
XRCC4-201ENST00000282268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
XRCC4-201ENST00000282268 KAT6AQ92794 2004 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 CNTNAP2Q9UHC6 1331 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 SIP14410 1827 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 A0A1W2PQC6 194 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 LRRIQ3A6PVS8 624 aaPredicted RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 AKR1B15C9JRZ8 316 aaPredicted RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 NPTXRO95502 500 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 LDHAP00338 332 aaKnown RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 GYPCP04921 128 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 TRIM21P19474 475 aaKnown RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 SLC9A1P19634 815 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 IBSPP21815 317 aaPredicted RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 EIF4BP23588 611 aaKnown RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 FMO5P49326 533 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 FXR1P51114 621 aaKnown RBP eCLIP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 ATN1P54259 1190 aaPredicted RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 WNT7BP56706 349 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 GSDMDP57764 484 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 MYL7Q01449 175 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 MCL1Q07820 350 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 PPP3CAQ08209 521 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 NCBP1Q09161 790 aaKnown RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 KCNMA1Q12791 1236 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 FBXO46Q6PJ61 603 aaPredicted RBP12.37□□□□□ -0.43
XRCC4-201ENST00000282268 SESTD1Q86VW0 696 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 TMEM192Q8IY95 271 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 NEK11Q8NG66 645 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 KCNN1Q92952 543 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 MFSD14AQ96MC6 490 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 ERGIC2Q96RQ1 377 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 KIAA1586Q9HCI6 787 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
XRCC4-201ENST00000282268 ITIH6Q6UXX5 1313 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 DNM1LO00429 736 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 ABLIM1O14639 778 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 EPHB6O15197 1021 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 OGTO15294 1046 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 B4GALT4O60513 344 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 CLSTN1O94985 981 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 SFPQP23246 707 aaKnown RBP eCLIP12.36□□□□□ -0.43
XRCC4-201ENST00000282268 C1orf220Q5T0J3 134 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 GBP6Q6ZN66 633 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 TMEM174Q8WUU8 243 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 DHX38Q92620 1227 aaKnown RBP12.36□□□□□ -0.43
XRCC4-201ENST00000282268 PRIMPOLQ96LW4 560 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 FNBP1Q96RU3 617 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 SENP6Q9GZR1 1112 aaPredicted RBP12.36□□□□□ -0.43
XRCC4-201ENST00000282268 KCNF1Q9H3M0 494 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 PTPRHQ9HD43 1115 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 GCNT4Q9P109 453 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 PIN4Q9Y237 131 aaKnown RBP12.36□□□□□ -0.43
XRCC4-201ENST00000282268 SIK3Q9Y2K2 1263 aa12.36□□□□□ -0.43
XRCC4-201ENST00000282268 NOC2LQ9Y3T9 749 aaKnown RBP12.36□□□□□ -0.43
XRCC4-201ENST00000282268 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 ARVCFO00192 962 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 KIAA0391O15091 583 aaKnown RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 MAPK13O15264 365 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 CHRNA1P02708 482 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 TNNI1P19237 187 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms