RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 COG5Q9UP83 839 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 PTPN22Q9Y2R2 807 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 ZNF233A6NK53 670 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 SMIM23A6NLE4 172 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 PGRMC1O00264 195 aaKnown RBP6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 MCM3P25205 808 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 IREB2P48200 963 aaKnown RBP6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 ATP1A2P50993 1020 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 PDE6CP51160 858 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 ALDH5A1P51649 535 aaPredicted RBP6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 TNNC1P63316 161 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 WDR93Q6P2C0 686 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 RHPN2Q8IUC4 686 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 MAP4K3Q8IVH8 894 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 SH2D3CQ8N5H7 860 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 RNF149Q8NC42 400 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 TSEN2Q8NCE0 465 aaKnown RBP6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 LMBR1Q8WVP7 490 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 RFFLQ8WZ73 363 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 KRT35Q92764 455 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 CDHR1Q96JP9 859 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 PCDHB18PQ96TA0 734 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 FAM118BQ9BPY3 351 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 TRIM51Q9BSJ1 452 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 TRIM7Q9C029 511 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 EFCC1Q9HA90 598 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 C1orf112Q9NSG2 853 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 ANKEF1Q9NU02 776 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 TSKSQ9UJT2 592 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 AGO2Q9UKV8 859 aaKnown RBP6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 HPCAL4Q9UM19 191 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 USTQ9Y2C2 406 aa6.52□□□□□ -1.37
TNFSF4-201ENST00000281834 GTPBP10A4D1E9 387 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ANKRD65E5RJM6 399 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 TTI1O43156 1089 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 GJB6O95452 261 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 OATP04181 439 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 KRT19P08727 400 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ATP4AP20648 1035 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 MUTP22033 750 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 PRKCIP41743 596 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 SF3A3Q12874 501 aaKnown RBP eCLIP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 KCTD2Q14681 263 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 TMEM270Q6UE05 265 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 GPD1LQ8N335 351 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 USP38Q8NB14 1042 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 OR2W6PQ8NHA6 318 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 LMO3Q8TAP4 145 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 HNRNPLLQ8WVV9 542 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 CEP89Q96ST8 783 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 PDGFCQ9NRA1 345 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 RBAKQ9NYW8 714 aaPredicted RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ZNF112Q9UJU3 913 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 POLR2AP24928 1970 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 DAPK3O43293 454 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ARIH2O95376 493 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 MAPTP10636 758 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 VPS41P49754 854 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 MFAP3P55082 362 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 TUBB4BP68371 445 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 TFAMQ00059 246 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ORC1Q13415 861 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 WDR44Q5JSH3 913 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 IFT20Q8IY31 132 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 PRPF31Q8WWY3 499 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 CASKIN2Q8WXE0 1202 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 SPON1Q9HCB6 807 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 RNF19AQ9NV58 838 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ALG6Q9Y672 507 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 UBE4BO95155 1302 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 SOWAHBA6NEL2 793 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 SPATA31C2B4DYI2 1134 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 HSF2BPO75031 334 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 POTEJP0CG39 1038 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 FDX1P10109 184 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 GLRA2P23416 452 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 HPDP32754 393 aaPredicted RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 TNFSF9P41273 254 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 CLCN3P51790 818 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 CYP24A1Q07973 514 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 SNX1Q13596 522 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ALCAMQ13740 583 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 MAP1SQ66K74 1059 aaPredicted RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 LBX2Q6XYB7 198 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 TAS1R3Q7RTX0 852 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 NT5DC3Q86UY8 548 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 MMGT1Q8N4V1 131 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 LRRC57Q8N9N7 239 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 EPS8L1Q8TE68 723 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 UBLCP1Q8WVY7 318 aaPredicted RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ALG3Q92685 438 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 OPTNQ96CV9 577 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 RNPC3Q96LT9 517 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 SPATA33Q96N06 139 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 C11orf70Q9BRQ4 267 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 NUP85Q9BW27 656 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 STRA6Q9BX79 667 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms