RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 VCAM1P19320 739 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 RIPK1Q13546 671 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 CAPRIN2Q6IMN6 1127 aaKnown RBP12.2□□□□□ -0.46
SCLT1-201ENST00000281142 VPS36Q86VN1 386 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 APOBEC3FQ8IUX4 373 aaKnown RBP12.2□□□□□ -0.46
SCLT1-201ENST00000281142 RFFLQ8WZ73 363 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 KLHL29Q96CT2 875 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 RMDN2Q96LZ7 410 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 CSRNP1Q96S65 589 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 TTC7AQ9ULT0 858 aaPredicted RBP12.2□□□□□ -0.46
SCLT1-201ENST00000281142 SH3BP1Q9Y3L3 701 aa12.2□□□□□ -0.46
SCLT1-201ENST00000281142 RASGRF2O14827 1237 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 RIPK2O43353 540 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 LRRN2O75325 713 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 SMNDC1O75940 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 SNUPNO95149 360 aaKnown RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 OAS1P00973 400 aaKnown RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 SNX1Q13596 522 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 TNFAIP1Q13829 316 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 DRAP1Q14919 205 aaPredicted RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 ARHGAP44Q17R89 818 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 HYIQ5T013 277 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 ADGRF4Q8IZF3 695 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 FITM2Q8N6M3 262 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 DYDC1Q8WWB3 177 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 DNAJC18Q9H819 358 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 NOP53Q9NZM5 478 aaKnown RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 PITPNM2Q9BZ72 1349 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 CFAP73A6NFT4 308 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 ACSL3O95573 720 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 AGTP01019 485 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 ALADP13716 330 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 ABL2P42684 1182 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 RWDD2BP57060 319 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 CYP4A11Q02928 519 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 GABPAQ06546 454 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 MPP2Q14168 576 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 COG2Q14746 738 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 NUGGCQ68CJ6 796 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 MIS18BP1Q6P0N0 1132 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 CATSPER3Q86XQ3 398 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 SLC17A8Q8NDX2 589 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 CTNNBL1Q8WYA6 563 aaPredicted RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 NT5C3AQ9H0P0 336 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 SLC5A4Q9NY91 659 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 TRAF3IP3Q9Y228 551 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 USP15Q9Y4E8 981 aaPredicted RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 NCANO14594 1321 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 PFASO15067 1338 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 GOLGA6L10A0A0M3HER8 536 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 USP17L10C9JJH3 530 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 ADM5C9JUS6 153 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 TRIM49P0CI25 452 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 TRIM49CP0CI26 452 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 MYBL1P10243 752 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 TAL1P17542 331 aaPredicted RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 STAT1P42224 750 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 NPEPPSP55786 919 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 GALNTL6Q49A17 601 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 ANKLE1Q8NAG6 615 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 SLC20A1Q8WUM9 679 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
SCLT1-201ENST00000281142 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 GPR88Q9GZN0 384 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 CARD9Q9H257 536 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 PI4KBQ9UBF8 816 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 SERPINB13Q9UIV8 391 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 DNAJC12Q9UKB3 198 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 PCDHA3Q9Y5H8 950 aa12.19□□□□□ -0.46
SCLT1-201ENST00000281142 TMEM120BA0PK00 339 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 ATMINO43313 823 aaPredicted RBP12.18□□□□□ -0.46
SCLT1-201ENST00000281142 GCNT3O95395 438 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 HLA-DOAP06340 250 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 AKR1B1P15121 316 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 SOX5P35711 763 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 RNASELQ05823 741 aaKnown RBP12.18□□□□□ -0.46
SCLT1-201ENST00000281142 MGAT5Q09328 741 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 C6orf118Q5T5N4 469 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 THEMIS2Q5TEJ8 643 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 ZNF746Q6NUN9 644 aaPredicted RBP12.18□□□□□ -0.46
SCLT1-201ENST00000281142 KCTD1Q719H9 257 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
SCLT1-201ENST00000281142 CCDC134Q9H6E4 229 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■■■■ 94.8
SCLT1-201ENST00000281142 ADAM22Q9P0K1 906 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 ALG6Q9Y672 507 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 KDM3AQ9Y4C1 1321 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 FAM187AA6NFU0 413 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 TMEM253P0C7T8 217 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 FERP16591 822 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 COPS2P61201 443 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 BNIP1Q12981 228 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 RBBP5Q15291 538 aaKnown RBP12.18□□□□□ -0.46
SCLT1-201ENST00000281142 CBWD6Q4V339 395 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 CBWD3Q5JTY5 395 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 CBWD5Q5RIA9 395 aa12.18□□□□□ -0.46
SCLT1-201ENST00000281142 NBPF12Q5TAG4 269 aaPredicted RBP12.18□□□□□ -0.46
SCLT1-201ENST00000281142 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms