RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 MFSD1Q9H3U5 465 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 GPRC5CQ9NQ84 441 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 PARP2Q9UGN5 583 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 LIMD1Q9UGP4 676 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 USTQ9Y2C2 406 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 F8W810 466 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 INPPL1O15357 1258 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 GLUD1P00367 558 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 MYBP10242 640 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 AVPR2P30518 371 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 DSC1Q08554 894 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 TCF15Q12870 199 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 GRIK3Q13003 919 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 GNL2Q13823 731 aaKnown RBP14.14□□□□□ -0.15
CD44-203ENST00000278386 POTEGQ6S5H5 508 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 OTOP3Q7RTS5 596 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 GLYCTKQ8IVS8 523 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 MCPH1Q8NEM0 835 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 ERMNQ8TAM6 284 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 C8orf76Q96K31 380 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 COLEC11Q9BWP8 271 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 TUFT1Q9NNX1 390 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 FAM86C1Q9NVL1 165 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 PRMT7Q9NVM4 692 aaPredicted RBP14.14□□□□□ -0.15
CD44-203ENST00000278386 MIOSQ9NXC5 875 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 KLK14Q9P0G3 267 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 DOCK8Q8NF50 2099 aa14.14□□□□□ -0.15
CD44-203ENST00000278386 VWA8A3KMH1 1905 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 ZMYM2Q9UBW7 1377 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 MYH11P35749 1972 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 ARHGEF35A5YM69 484 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 TEX28O15482 410 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 LILRB3O75022 631 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 MED24O75448 989 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 OR52Z1P0C646 297 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 LIG1P18858 919 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 FUT10Q6P4F1 479 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 C15orf39Q6ZRI6 1047 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 TAS1R1Q7RTX1 841 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 DPP7Q9UHL4 492 aa14.13□□□□□ -0.15
CD44-203ENST00000278386 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 XRCC6P12956 609 aaKnown RBP eCLIP14.12□□□□□ -0.15
CD44-203ENST00000278386 GBP2P32456 591 aaPredicted RBP14.12□□□□□ -0.15
CD44-203ENST00000278386 DSG1Q02413 1049 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 ZNF174Q15697 407 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 HAUS3Q68CZ6 603 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 CDCA2Q69YH5 1023 aaPredicted RBP14.12□□□□□ -0.15
CD44-203ENST00000278386 CATSPER3Q86XQ3 398 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 RNF168Q8IYW5 571 aaPredicted RBP14.12□□□□□ -0.15
CD44-203ENST00000278386 RABGGTAQ92696 567 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 ATOH1Q92858 354 aaPredicted RBP14.12□□□□□ -0.15
CD44-203ENST00000278386 B3GALT6Q96L58 329 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 PRIMPOLQ96LW4 560 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 NACC1Q96RE7 527 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 C2orf40Q9H1Z8 148 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 ADAM28Q9UKQ2 775 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 CLUHO75153 1309 aa14.12□□□□□ -0.15
CD44-203ENST00000278386 CCDC195A0A1B0GUA6 201 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 A0A1B0GUA9 196 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 CITO14578 2027 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 N4BP3O15049 544 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 RFPL2O75678 378 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 PRKCBP05771 671 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 USP41Q3LFD5 358 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 TTC38Q5R3I4 469 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 PALB2Q86YC2 1186 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 FAM184AQ8NB25 1140 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 FLCNQ8NFG4 579 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 CMASQ8NFW8 434 aaPredicted RBP14.11□□□□□ -0.15
CD44-203ENST00000278386 DEPTORQ8TB45 409 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 HASPINQ8TF76 798 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 RIN2Q8WYP3 895 aaPredicted RBP14.11□□□□□ -0.15
CD44-203ENST00000278386 SMG7Q92540 1137 aaKnown RBP14.11□□□□□ -0.15
CD44-203ENST00000278386 STAMQ92783 540 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 ADPGKQ9BRR6 497 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 POLR3CQ9BUI4 534 aaPredicted RBP14.11□□□□□ -0.15
CD44-203ENST00000278386 IRF2BPLQ9H1B7 796 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 PIDD1Q9HB75 910 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.11□□□□□ -0.15
CD44-203ENST00000278386 CACNG4Q9UBN1 327 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 LIMCH1Q9UPQ0 1083 aa14.11□□□□□ -0.15
CD44-203ENST00000278386 SF3B1O75533 1304 aaKnown RBP eCLIP14.11□□□□□ -0.158e-6■■■■■ 107
CD44-203ENST00000278386 MYH15Q9Y2K3 1946 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 CASTOR2A6NHX0 329 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 TADA2AO75478 443 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 RECQL4O94761 1208 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 SEC24BO95487 1268 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 SPATA31D3P0C874 917 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 NAMPTP43490 491 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 CREMQ03060 361 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 ORC2Q13416 577 aaPredicted RBP14.1□□□□□ -0.15
CD44-203ENST00000278386 PRPF4BQ13523 1007 aaKnown RBP14.1□□□□□ -0.15
CD44-203ENST00000278386 HSP90AA2PQ14568 343 aaPredicted RBP14.1□□□□□ -0.15
CD44-203ENST00000278386 MAPK6Q16659 721 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 KIAA0319Q5VV43 1072 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 PADI6Q6TGC4 694 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 SPATA31D4Q6ZUB0 917 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 GSTCDQ8NEC7 633 aa14.1□□□□□ -0.15
CD44-203ENST00000278386 BSNDQ8WZ55 320 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms