RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CPB2Q96IY4 423 aa10□□□□□ -0.81
TPM3-201ENST00000271850 ZFP42Q96MM3 310 aa10□□□□□ -0.81
TPM3-201ENST00000271850 NECTIN4Q96NY8 510 aa10□□□□□ -0.81
TPM3-201ENST00000271850 HSD17B14Q9BPX1 270 aa10□□□□□ -0.81
TPM3-201ENST00000271850 CXCL16Q9H2A7 254 aa10□□□□□ -0.81
TPM3-201ENST00000271850 DZANK1Q9NVP4 752 aa10□□□□□ -0.81
TPM3-201ENST00000271850 CACNG4Q9UBN1 327 aa10□□□□□ -0.81
TPM3-201ENST00000271850 LIMD1Q9UGP4 676 aa10□□□□□ -0.81
TPM3-201ENST00000271850 NR2E1Q9Y466 385 aa10□□□□□ -0.81
TPM3-201ENST00000271850 IPPQ9Y573 584 aa10□□□□□ -0.81
TPM3-201ENST00000271850 DOCK8Q8NF50 2099 aa10□□□□□ -0.81
TPM3-201ENST00000271850 CCDC194A0A1B0GVG4 234 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 TBX3O15119 743 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 B4GALT5O43286 388 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 PAPLNO95428 1278 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 EDN1P05305 212 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 MYBP10242 640 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 SKIP12755 728 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 GCFC2P16383 781 aaKnown RBP9.99□□□□□ -0.81
TPM3-201ENST00000271850 MLH1P40692 756 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 RFC5P40937 340 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 PTENP60484 403 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 MBTD1Q05BQ5 628 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 MTMR3Q13615 1198 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 CAPSQ13938 189 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 ME3Q16798 604 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 KIAA0319Q5VV43 1072 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 NCAPH2Q6IBW4 605 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 CES5AQ6NT32 575 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 CDR2LQ86X02 465 aaPredicted RBP9.99□□□□□ -0.81
TPM3-201ENST00000271850 NECAB1Q8N987 351 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 SLC7A3Q8WY07 619 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 RSPH1Q8WYR4 309 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 DDX12PQ92771 950 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 B3GALT6Q96L58 329 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 GAD1Q99259 594 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 MTRQ99707 1265 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 TMEM175Q9BSA9 504 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 HERC2P3Q9BVR0 1158 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 INO80BQ9C086 356 aaPredicted RBP9.99□□□□□ -0.81
TPM3-201ENST00000271850 NXF3Q9H4D5 531 aaKnown RBP9.99□□□□□ -0.81
TPM3-201ENST00000271850 USTQ9Y2C2 406 aa9.99□□□□□ -0.81
TPM3-201ENST00000271850 PRG3Q9Y2Y8 225 aaPredicted RBP9.99□□□□□ -0.81
TPM3-201ENST00000271850 RIF1Q5UIP0 2472 aaKnown RBP9.99□□□□□ -0.81
TPM3-201ENST00000271850 GVINP1Q7Z2Y8 2422 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 WDR87Q6ZQQ6 2873 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 TEX28O15482 410 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 MAP3K7O43318 606 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 PI15O43692 258 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 NARSO43776 548 aaKnown RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 JAK2O60674 1132 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 LYPLA2O95372 231 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 SOD2P04179 222 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 ARF4P18085 180 aaPredicted RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 GLRA2P23416 452 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 IGFBP6P24592 240 aaPredicted RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 ARL2P36404 184 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 SCNN1GP51170 649 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 AK2P54819 239 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 RNASELQ05823 741 aaKnown RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 GIT2Q14161 759 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 ASCL5Q7RTU5 278 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 ZBTB33Q86T24 672 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 CABP7Q86V35 215 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 UBALD2Q8IYN6 164 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 TDRD5Q8NAT2 981 aaKnown RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 NSUN7Q8NE18 718 aaKnown RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 ZNF707Q96C28 371 aaPredicted RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 PGBD4Q96DM1 585 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 MTMR9Q96QG7 549 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 EIF2AK1Q9BQI3 630 aaKnown RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 PAAF1Q9BRP4 392 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 SLKQ9H2G2 1235 aaPredicted RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 TMEM60Q9H2L4 133 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 SFXN1Q9H9B4 322 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 GPRC5CQ9NQ84 441 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 DBR1Q9UK59 544 aaKnown RBP9.98□□□□□ -0.81
TPM3-201ENST00000271850 PPME1Q9Y570 386 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 DOCK6Q96HP0 2047 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 COL4A3Q01955 1670 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 CNTNAP2Q9UHC6 1331 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 SPTBN4Q9H254 2564 aa9.98□□□□□ -0.81
TPM3-201ENST00000271850 BTBD18B2RXH4 712 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 PROB1E7EW31 1015 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 C2CD2LO14523 706 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 RFPL2O75678 378 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 SPATA31C1P0DKV0 1188 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 RARRES1P49788 294 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 CAMK2BQ13554 666 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 XKR9Q5GH70 373 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 ATAT1Q5SQI0 421 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 TPH2Q8IWU9 490 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 RSAD2Q8WXG1 361 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 RABGGTAQ92696 567 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 RPS6KC1Q96S38 1066 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 MYADMQ96S97 322 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 PRRX2Q99811 253 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 JPH2Q9BR39 696 aaPredicted RBP9.97□□□□□ -0.81
TPM3-201ENST00000271850 GPR62Q9BZJ7 368 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms