RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 ZNF577Q9BSK1 485 aa11.78□□□□□ -0.52
CHFR-201ENST00000266880 GRID2IPA4D2P6 1211 aa11.78□□□□□ -0.52
CHFR-201ENST00000266880 CHRNA3P32297 505 aa11.78□□□□□ -0.52
CHFR-201ENST00000266880 C16orf72Q14CZ0 275 aa11.78□□□□□ -0.52
CHFR-201ENST00000266880 LPIN2Q92539 896 aa11.78□□□□□ -0.52
CHFR-201ENST00000266880 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
CHFR-201ENST00000266880 ACAP3Q96P50 834 aa11.78□□□□□ -0.52
CHFR-201ENST00000266880 FANCEQ9HB96 536 aa11.78□□□□□ -0.52
CHFR-201ENST00000266880 CPA2P48052 419 aa11.78□□□□□ -0.52
CHFR-201ENST00000266880 TAF1DQ9H5J8 278 aaPredicted RBP11.78□□□□□ -0.52
CHFR-201ENST00000266880 WLSQ5T9L3 541 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 IZUMO3Q5VZ72 239 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 CENPTQ96BT3 561 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 RPAP3Q9H6T3 665 aaPredicted RBP11.77□□□□□ -0.52
CHFR-201ENST00000266880 AIPL1Q9NZN9 384 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 POLR3AO14802 1390 aaPredicted RBP11.77□□□□□ -0.52
CHFR-201ENST00000266880 IL2RBP14784 551 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 SSTR3P32745 418 aaPredicted RBP11.77□□□□□ -0.52
CHFR-201ENST00000266880 ARPC4P59998 168 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 DNAL1Q4LDG9 190 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 OR6P1Q8NGX9 317 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 ATL2Q8NHH9 583 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 ADAMTS1Q9UHI8 967 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 USP19O94966 1318 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 SLC16A1P53985 500 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 POTEAQ6S8J7 498 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 KLHL17Q6TDP4 642 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 RBM46Q8TBY0 533 aaKnown RBP11.77□□□□□ -0.52
CHFR-201ENST00000266880 UBASH3BQ8TF42 649 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 PCDHA4Q9UN74 947 aa11.77□□□□□ -0.52
CHFR-201ENST00000266880 HSMCR30P0CW71 290 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 ATP5JP18859 108 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 SOX6P35712 828 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 FLT3P36888 993 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 ATP12AP54707 1039 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 NDST4Q9H3R1 872 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 ZFYVE9O95405 1425 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 LAD1O00515 517 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 MDH1P40925 334 aaKnown RBP11.77□□□□□ -0.53
CHFR-201ENST00000266880 PKN3Q6P5Z2 889 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 KLHL24Q6TFL4 600 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 KLHL11Q9NVR0 708 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 ADGBQ8N7X0 1667 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 PIPSLA2A3N6 862 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 LGALS16A8MUM7 142 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 CDC25AP30304 524 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 FEN1P39748 380 aaKnown RBP11.77□□□□□ -0.53
CHFR-201ENST00000266880 NDUFA5Q16718 116 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 DIS3LQ8TF46 1054 aaKnown RBP11.77□□□□□ -0.53
CHFR-201ENST00000266880 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 ADAM22Q9P0K1 906 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 CNOT8Q9UFF9 292 aaKnown RBP11.77□□□□□ -0.53
CHFR-201ENST00000266880 DTNAQ9Y4J8 743 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 PDE8AO60658 829 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 PLA2G4BP0C869 781 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 THEMIS2Q5TEJ8 643 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 RHOT2Q8IXI1 618 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 MSTO1Q9BUK6 570 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 FAM135BQ49AJ0 1406 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 TYK2P29597 1187 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 COX10Q12887 443 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 SHQ1Q6PI26 577 aaKnown RBP11.77□□□□□ -0.53
CHFR-201ENST00000266880 GRAMD1AQ96CP6 724 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 H2AFY2Q9P0M6 372 aaPredicted RBP11.77□□□□□ -0.53
CHFR-201ENST00000266880 R3HDM2Q9Y2K5 976 aaKnown RBP11.77□□□□□ -0.53
CHFR-201ENST00000266880 KLHL20Q9Y2M5 609 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 VSNL1P62760 191 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 MS4A14Q96JA4 679 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 NOD2Q9HC29 1040 aa11.77□□□□□ -0.53
CHFR-201ENST00000266880 CYP2C19P33261 490 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 FOXP1Q9H334 677 aaPredicted RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 PCSK1NQ9UHG2 260 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 FAM153AQ9UHL3 310 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 CARD8Q9Y2G2 431 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 ADGRA2Q96PE1 1338 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 SUPT3HB4E1H0 165 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 XPOTO43592 962 aaKnown RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 MFN2O95140 757 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 RALBP11234 206 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 IFNL3Q8IZI9 196 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 QKIQ96PU8 341 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHFR-201ENST00000266880 KDM4CQ9H3R0 1056 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 NOL6Q9H6R4 1146 aaKnown RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 UBXN8O00124 270 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 TRIM24O15164 1050 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 ATP1A1P05023 1023 aaKnown RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 COBLL1Q53SF7 1204 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 TRAPPC3LQ5T215 181 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 ZNF746Q6NUN9 644 aaPredicted RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 WDR24Q96S15 920 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 SERPINB13Q9UIV8 391 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 PCDHGB4Q9UN71 923 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 ARPC4-TTLL3A0A0A6YYG9 625 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 MTRF1O75570 445 aaKnown RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 TARSP26639 723 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms