RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 RFC5P40937 340 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 GMPSP49915 693 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-201ENST00000264555 TPD52P55327 224 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-201ENST00000264555 NUGGCQ68CJ6 796 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 MMGT1Q8N4V1 131 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 KLHL29Q96CT2 875 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 SLC12A6Q9UHW9 1150 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 HUS1O60921 280 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 SDC4P31431 198 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 ACOT2P49753 483 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 RAPH1Q70E73 1250 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 GPRASP2Q96D09 838 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 TACO1Q9BSH4 297 aaKnown RBP17.81■□□□□ 0.44
PHRF1-201ENST00000264555 GIT2Q14161 759 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 TEX2Q8IWB9 1127 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 BBS5Q8N3I7 341 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 C1orf54Q8WWF1 131 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 ZNF668Q96K58 619 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-201ENST00000264555 TAAR1Q96RJ0 339 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 FBXO28Q9NVF7 368 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
PHRF1-201ENST00000264555 LRP10Q7Z4F1 713 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 CCDC68Q9H2F9 335 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 SUCLA2Q9P2R7 463 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-201ENST00000264555 RASA4BC9J798 803 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 RASA4O43374 803 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 NOA1Q8NC60 698 aaKnown RBP17.8■□□□□ 0.44
PHRF1-201ENST00000264555 C17orf75Q9HAS0 396 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 CYP26B1Q9NR63 512 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 IGSF9BQ9UPX0 1349 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 KRT14P02533 472 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 IRX4P78413 519 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 SPARCL1Q14515 664 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 KIAA1755Q5JYT7 1200 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 HNRNPLLQ8WVV9 542 aaKnown RBP17.8■□□□□ 0.44
PHRF1-201ENST00000264555 ATG4CQ96DT6 458 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 GCOM2Q9BZD3 368 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-201ENST00000264555 TXLNGQ9NUQ3 528 aa17.8■□□□□ 0.44
PHRF1-201ENST00000264555 KRT37O76014 449 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 NFX1Q12986 1120 aaKnown RBP17.79■□□□□ 0.44
PHRF1-201ENST00000264555 CHST13Q8NET6 341 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 PCSK1NQ9UHG2 260 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 CAMTA1Q9Y6Y1 1673 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 PLEKP08567 350 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-201ENST00000264555 RPS6KA2Q15349 733 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 FAM133BQ5BKY9 247 aaKnown RBP17.79■□□□□ 0.44
PHRF1-201ENST00000264555 TUBB6Q9BUF5 446 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 ELP3Q9H9T3 547 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 GMNCA6NCL1 334 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 FOXP2O15409 715 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 MUM1Q2TAK8 710 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 SYDE1Q6ZW31 735 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-201ENST00000264555 SAMD3Q8N6K7 520 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 ATL2Q8NHH9 583 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 BEGAINQ9BUH8 593 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 SLC30A5Q8TAD4 765 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 DEPDC1BQ8WUY9 529 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 NFAT5O94916 1531 aa17.79■□□□□ 0.44
PHRF1-201ENST00000264555 C15orf52Q6ZUT6 534 aaKnown RBP17.79■□□□□ 0.44
PHRF1-201ENST00000264555 ELAC2Q9BQ52 826 aaKnown RBP17.79■□□□□ 0.44
PHRF1-201ENST00000264555 PHF2O75151 1096 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 PON1P27169 355 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 HOXA10P31260 410 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-201ENST00000264555 NCOA4Q13772 614 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 KLHL38Q2WGJ6 581 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 SMARCAD1Q9H4L7 1026 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 PFDN4Q9NQP4 134 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 TFR2Q9UP52 801 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 PIK3C2AO00443 1686 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 A0A087X0B3 334 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 RSPH10B2B2RC85 870 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 RSPH10BP0C881 870 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 NPEPPSP55786 919 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 MDM2Q00987 491 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-201ENST00000264555 KRT17Q04695 432 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 GPS1Q13098 491 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 CFAP61Q8NHU2 1237 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 GGA3Q9NZ52 723 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 TTC7AQ9ULT0 858 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-201ENST00000264555 PCDHB2Q9Y5E7 798 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 TTI1O43156 1089 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 TRAPPC11Q7Z392 1133 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 GBP7Q8N8V2 638 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-201ENST00000264555 USP38Q8NB14 1042 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 PITPNM3Q9BZ71 974 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 TWF2Q6IBS0 349 aaKnown RBP17.78■□□□□ 0.44
PHRF1-201ENST00000264555 SCYL3Q8IZE3 742 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 TLK1Q9UKI8 766 aa17.78■□□□□ 0.44
PHRF1-201ENST00000264555 SGSM1Q2NKQ1 1148 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 GSDMBQ8TAX9 411 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 RNF139Q8WU17 664 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 HEY1Q9Y5J3 304 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 ATRNO75882 1429 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 EXTL3O43909 919 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 ASPHQ12797 758 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 EPM2AIP1Q7L775 607 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-201ENST00000264555 SCFD1Q8WVM8 642 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 CPA5Q8WXQ8 436 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 TBX20Q9UMR3 447 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 AFG3L2Q9Y4W6 797 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms