RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PFASO15067 1338 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 A0A1W2PRG0 241 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 SLC16A4O15374 487 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 AGTP01019 485 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 NUDT17P0C025 328 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 ANXA13P27216 316 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 STX2P32856 288 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 ADCY8P40145 1251 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 PPP2R5EQ16537 467 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 PADI6Q6TGC4 694 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 SLC13A5Q86YT5 568 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-201ENST00000263856 KCNV2Q8TDN2 545 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 C9orf72Q96LT7 481 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 MBOAT7Q96N66 472 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 NACC1Q96RE7 527 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 HSD17B14Q9BPX1 270 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-201ENST00000263856 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 ANAPC7Q9UJX3 599 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
CHMP3-201ENST00000263856 SRRM3A6NNA2 597 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-201ENST00000263856 TCP10L2B9ZVM9 353 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 PODXLO00592 558 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 SORBS3O60504 671 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 SLC8A1P32418 973 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 STAT2P52630 851 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 PEX3P56589 373 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 MOXD1Q6UVY6 613 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 TMEM179Q6ZVK1 233 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 C3orf20Q8ND61 904 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 ACER1Q8TDN7 264 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 PGM2Q96G03 612 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 CSRNP1Q96S65 589 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 PI4K2AQ9BTU6 479 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 TXLNGYQ9BZA5 131 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 CHST7Q9NS84 486 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 NYAP2Q9P242 653 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 PARP2Q9UGN5 583 aa13.29□□□□□ -0.28
CHMP3-201ENST00000263856 CLRN2A0PK11 232 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 MIF4GDA9UHW6 222 aaKnown RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 IGF2BP3O00425 579 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 TOM1O60784 492 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 BRAFP15056 766 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 SP4Q02446 784 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 XRCC4Q13426 336 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 CNGA2Q16280 664 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 PAXIP1Q6ZW49 1069 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 MIER3Q7Z3K6 550 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 STMN4Q9H169 189 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 KLHL11Q9NVR0 708 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 PPIP5K2O43314 1243 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 SLMAPQ14BN4 828 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 LMBRD2Q68DH5 695 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 EP400NLQ6ZTU2 488 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 CPXCR1Q8N123 301 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 TAB3Q8N5C8 712 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 FBXO28Q9NVF7 368 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 IGLV3-22A0A075B6J6 115 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 IPO5O00410 1097 aaKnown RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 RTN2O75298 545 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 SPAG7O75391 227 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 PDE6CP51160 858 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 RWDD2BP57060 319 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 TMED2Q15363 201 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 GSTA5Q7RTV2 222 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 NSMCE1Q8WV22 266 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 CRYGNQ8WXF5 182 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 TEKT3Q9BXF9 490 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 HSPBP1Q9NZL4 362 aa13.28□□□□□ -0.28
CHMP3-201ENST00000263856 LARSQ9P2J5 1176 aaKnown RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 TTC7AQ9ULT0 858 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-201ENST00000263856 DNAJC8O75937 253 aaPredicted RBP13.27□□□□□ -0.28
CHMP3-201ENST00000263856 MAPK4P31152 587 aa13.27□□□□□ -0.28
CHMP3-201ENST00000263856 LACTB2Q53H82 288 aaPredicted RBP13.27□□□□□ -0.28
CHMP3-201ENST00000263856 CBWD2Q8IUF1 395 aa13.27□□□□□ -0.28
CHMP3-201ENST00000263856 PASD1Q8IV76 773 aa13.27□□□□□ -0.28
CHMP3-201ENST00000263856 EPS8L1Q8TE68 723 aa13.27□□□□□ -0.28
CHMP3-201ENST00000263856 LBHD1Q9BQE6 289 aaPredicted RBP13.27□□□□□ -0.28
CHMP3-201ENST00000263856 MKNK1Q9BUB5 465 aa13.27□□□□□ -0.28
CHMP3-201ENST00000263856 TUFT1Q9NNX1 390 aa13.27□□□□□ -0.28
CHMP3-201ENST00000263856 NEBLO76041 1014 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 ALDH5A1P51649 535 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-201ENST00000263856 ITGA8P53708 1063 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 MTM1Q13496 603 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 RASA3Q14644 834 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 KIF22Q14807 665 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 PPP2R5AQ15172 486 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 CEP55Q53EZ4 464 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 FAM102BQ5T8I3 360 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 KAZNQ674X7 775 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 COL23A1Q86Y22 540 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-201ENST00000263856 AGAP11Q8TF27 550 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 RSRC1Q96IZ7 334 aaKnown RBP13.27□□□□□ -0.29
CHMP3-201ENST00000263856 TGS1Q96RS0 853 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms