RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 GTF2H1P32780 548 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.33
VPS26A-201ENST00000263559 WNT7BP56706 349 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 ENPEPQ07075 957 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 MAP2K5Q13163 448 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 ZNF484Q5JVG2 852 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 SV2AQ7L0J3 742 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 TXLNBQ8N3L3 684 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 PACSIN1Q9BY11 444 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 LUC7LQ9NQ29 371 aaKnown RBP17.12■□□□□ 0.33
VPS26A-201ENST00000263559 ADCY6O43306 1168 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 MOCS3O95396 460 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 SLC10A3P09131 477 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 ZBTB41Q5SVQ8 909 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 IQSEC1Q6DN90 963 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 C17orf99Q6UX52 265 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 ZBTB8OSQ8IWT0 167 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 TAS1R2Q8TE23 839 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 ZNF516Q92618 1163 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 FAM84AQ96KN4 292 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 NAGPAQ9UK23 515 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 CAPN6Q9Y6Q1 641 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 LDHAP00338 332 aaKnown RBP17.11■□□□□ 0.33
VPS26A-201ENST00000263559 ATP1A1P05023 1023 aaKnown RBP17.11■□□□□ 0.33
VPS26A-201ENST00000263559 AMPD2Q01433 879 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 PSMD6Q15008 389 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 PRAMEF19Q5SWL8 479 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 ZPBP2Q6X784 338 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 FBXL13Q8NEE6 735 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 KAT5Q92993 513 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 PASKQ96RG2 1323 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 KLRC1P26715 233 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 ERCC6LQ2NKX8 1250 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 LMBRD2Q68DH5 695 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-201ENST00000263559 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
VPS26A-201ENST00000263559 OR6J1Q8NGC5 347 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 NLRP4Q96MN2 994 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
VPS26A-201ENST00000263559 PDE11AQ9HCR9 933 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 RAB20Q9NX57 234 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 FLRT1Q9NZU1 646 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 HDAC6Q9UBN7 1215 aa17.11■□□□□ 0.33
VPS26A-201ENST00000263559 H3BRB1 525 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 DDX3XO00571 662 aaKnown RBP eCLIP17.1■□□□□ 0.333e-13■■□□□ 14
VPS26A-201ENST00000263559 CLDN3O15551 220 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TACC1O75410 805 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TFRCP02786 760 aaKnown RBP17.1■□□□□ 0.33
VPS26A-201ENST00000263559 PRKCBP05771 671 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 MMP3P08254 477 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 ANXA13P27216 316 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 GPC3P51654 580 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 CLDN10P78369 228 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TUBB2AQ13885 445 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 NAB2Q15742 525 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 SEZ6Q53EL9 994 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 ALKBH5Q6P6C2 394 aaKnown RBP17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TRIM58Q8NG06 486 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 ANKRD7Q92527 254 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 ACO2Q99798 780 aaKnown RBP17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TUBB2BQ9BVA1 445 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 C2orf40Q9H1Z8 148 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TUT1Q9H6E5 874 aaKnown RBP17.1■□□□□ 0.33
VPS26A-201ENST00000263559 BUB1O43683 1085 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TADA3O75528 432 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 HARSP12081 509 aaKnown RBP17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TNFAIP2Q03169 654 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 TFDP1Q14186 410 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 BMS1Q14692 1282 aaKnown RBP17.1■□□□□ 0.33
VPS26A-201ENST00000263559 MAPK6Q16659 721 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 C10orf76Q5T2E6 689 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 VPS36Q86VN1 386 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 DNAAF5Q86Y56 855 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 ELMO3Q96BJ8 720 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 FNBP1Q96RU3 617 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 RBAKQ9NYW8 714 aaPredicted RBP17.1■□□□□ 0.33
VPS26A-201ENST00000263559 NENFQ9UMX5 172 aa17.1■□□□□ 0.33
VPS26A-201ENST00000263559 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 FAM155AB1AL88 458 aaPredicted RBP17.09■□□□□ 0.33
VPS26A-201ENST00000263559 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 TNNI1P19237 187 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 INHBEP58166 350 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 ELF2Q15723 593 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 C15orf39Q6ZRI6 1047 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 ZBTB33Q86T24 672 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 PPM1KQ8N3J5 372 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 RNF10Q8N5U6 811 aaKnown RBP17.09■□□□□ 0.33
VPS26A-201ENST00000263559 LNX1Q8TBB1 728 aaPredicted RBP17.09■□□□□ 0.33
VPS26A-201ENST00000263559 KREMEN1Q96MU8 473 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 SYT11Q9BT88 431 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 KAT6AQ92794 2004 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 ASAP2O43150 1006 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 TOM1L1O75674 476 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 KIF22Q14807 665 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 PAPD7Q5XG87 772 aaKnown RBP17.09■□□□□ 0.33
VPS26A-201ENST00000263559 TRAPPC11Q7Z392 1133 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 SLC30A5Q8TAD4 765 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 HELQQ8TDG4 1101 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms