RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 A0A0U1RQG5 324 aaPredicted RBP24.7■■□□□ 1.54
UFD1-201ENST00000263202 FAM189A1O60320 539 aa24.7■■□□□ 1.54
UFD1-201ENST00000263202 DLG4P78352 724 aa24.7■■□□□ 1.54
UFD1-201ENST00000263202 MRPS6P82932 125 aaKnown RBP24.7■■□□□ 1.54
UFD1-201ENST00000263202 SNX17Q15036 470 aa24.7■■□□□ 1.54
UFD1-201ENST00000263202 PKN2Q16513 984 aaKnown RBP24.7■■□□□ 1.54
UFD1-201ENST00000263202 CPB2Q96IY4 423 aa24.7■■□□□ 1.54
UFD1-201ENST00000263202 ZNF333Q96JL9 665 aa24.7■■□□□ 1.54
UFD1-201ENST00000263202 CELF4Q9BZC1 486 aaKnown RBP24.7■■□□□ 1.54
UFD1-201ENST00000263202 TRMT13Q9NUP7 481 aaKnown RBP24.7■■□□□ 1.54
UFD1-201ENST00000263202 ZNF233A6NK53 670 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 RPLP2P05387 115 aaKnown RBP24.69■■□□□ 1.54
UFD1-201ENST00000263202 TRIM49P0CI25 452 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 TRIM49CP0CI26 452 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 ACOT2P49753 483 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 CYP24A1Q07973 514 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 NOLC1Q14978 699 aaKnown RBP eCLIP24.69■■□□□ 1.549e-7■■□□□ 13.8
UFD1-201ENST00000263202 PCBP1Q15365 356 aaKnown RBP eCLIP24.69■■□□□ 1.54
UFD1-201ENST00000263202 ZNF568Q3ZCX4 644 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 ZBTB41Q5SVQ8 909 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 CDR2LQ86X02 465 aaPredicted RBP24.69■■□□□ 1.54
UFD1-201ENST00000263202 PDZD7Q9H5P4 517 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 SIK3Q9Y2K2 1263 aa24.69■■□□□ 1.54
UFD1-201ENST00000263202 HARSP12081 509 aaKnown RBP24.68■■□□□ 1.54
UFD1-201ENST00000263202 KLK7P49862 253 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 KCNMA1Q12791 1236 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 PTK7Q13308 1070 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 HSP90AA2PQ14568 343 aaPredicted RBP24.68■■□□□ 1.54
UFD1-201ENST00000263202 C1orf220Q5T0J3 134 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.68■■□□□ 1.545e-7■□□□□ 9.8
UFD1-201ENST00000263202 TRPV2Q9Y5S1 764 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 CDY2AQ9Y6F7 541 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 OGTO15294 1046 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 CATSPER4Q7RTX7 472 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 TMC2Q8TDI7 906 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 PARD3BQ8TEW8 1205 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 CDT1Q9H211 546 aa24.68■■□□□ 1.54
UFD1-201ENST00000263202 DNAH12Q6ZR08 3092 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 A0A1B0GUA9 196 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 M0QZ92 97 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 GSDMDP57764 484 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 ENPEPQ07075 957 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 SEZ6Q53EL9 994 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 DHX38Q92620 1227 aaKnown RBP24.67■■□□□ 1.54
UFD1-201ENST00000263202 ARMC5Q96C12 935 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 TRIM44Q96DX7 344 aaPredicted RBP24.67■■□□□ 1.54
UFD1-201ENST00000263202 NOD1Q9Y239 953 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 ANK1P16157 1881 aa24.67■■□□□ 1.54
UFD1-201ENST00000263202 ARVCFO00192 962 aa24.66■■□□□ 1.54
UFD1-201ENST00000263202 SFPQP23246 707 aaKnown RBP eCLIP24.66■■□□□ 1.54
UFD1-201ENST00000263202 FMO5P49326 533 aa24.66■■□□□ 1.54
UFD1-201ENST00000263202 MGAT3Q09327 533 aa24.66■■□□□ 1.54
UFD1-201ENST00000263202 ARID5BQ14865 1188 aa24.66■■□□□ 1.54
UFD1-201ENST00000263202 CRISPLD2Q9H0B8 497 aa24.66■■□□□ 1.54
UFD1-201ENST00000263202 B4GALT4O60513 344 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 CHRNA1P02708 482 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 GYPCP04921 128 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 HOXA11P31270 313 aaPredicted RBP24.65■■□□□ 1.54
UFD1-201ENST00000263202 TNFSF9P41273 254 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 RBL2Q08999 1139 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 PSMD6Q15008 389 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 TRIM71Q2Q1W2 868 aaKnown RBP24.65■■□□□ 1.54
UFD1-201ENST00000263202 CCDC127Q96BQ5 260 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 PCMTD1Q96MG8 357 aaPredicted RBP24.65■■□□□ 1.54
UFD1-201ENST00000263202 SENP6Q9GZR1 1112 aaPredicted RBP24.65■■□□□ 1.54
UFD1-201ENST00000263202 RBAKQ9NYW8 714 aaPredicted RBP24.65■■□□□ 1.54
UFD1-201ENST00000263202 GTPBP10A4D1E9 387 aaKnown RBP24.65■■□□□ 1.54
UFD1-201ENST00000263202 LRRIQ3A6PVS8 624 aaPredicted RBP24.65■■□□□ 1.54
UFD1-201ENST00000263202 MCF2P10911 925 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 THPOP40225 353 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 PPP3CAQ08209 521 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 TRIM14Q14142 442 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 CBWD6Q4V339 395 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 HS1BP3Q53T59 392 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 CBWD3Q5JTY5 395 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 CBWD5Q5RIA9 395 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 PPFIBP1Q86W92 1011 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 CRACR2AQ9BSW2 395 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 SEZ6LQ9BYH1 1024 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 TRPV6Q9H1D0 765 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 MMRN2Q9H8L6 949 aa24.65■■□□□ 1.54
UFD1-201ENST00000263202 CPSF3Q9UKF6 684 aaKnown RBP24.65■■□□□ 1.54
UFD1-201ENST00000263202 SGPL1O95470 568 aa24.64■■□□□ 1.54
UFD1-201ENST00000263202 CTSHP09668 335 aa24.64■■□□□ 1.54
UFD1-201ENST00000263202 CDK7P50613 346 aa24.64■■□□□ 1.54
UFD1-201ENST00000263202 WNT7BP56706 349 aa24.64■■□□□ 1.54
UFD1-201ENST00000263202 NCBP1Q09161 790 aaKnown RBP24.64■■□□□ 1.54
UFD1-201ENST00000263202 USP37Q86T82 979 aa24.64■■□□□ 1.54
UFD1-201ENST00000263202 U2AF1L4Q8WU68 220 aaKnown RBP24.64■■□□□ 1.54
UFD1-201ENST00000263202 AGPAT5Q9NUQ2 364 aa24.64■■□□□ 1.54
UFD1-201ENST00000263202 AXLP30530 894 aa24.63■■□□□ 1.53
UFD1-201ENST00000263202 GOLGA8FQ08AF8 430 aa24.63■■□□□ 1.53
UFD1-201ENST00000263202 GOLGA8DPQ0D2H9 430 aa24.63■■□□□ 1.53
UFD1-201ENST00000263202 BRSK2Q8IWQ3 736 aa24.63■■□□□ 1.53
UFD1-201ENST00000263202 THNSL1Q8IYQ7 743 aa24.63■■□□□ 1.53
UFD1-201ENST00000263202 CEP120Q8N960 986 aa24.63■■□□□ 1.53
UFD1-201ENST00000263202 CACTINQ8WUQ7 758 aaKnown RBP24.63■■□□□ 1.53
UFD1-201ENST00000263202 CPLX3Q8WVH0 158 aa24.63■■□□□ 1.53
UFD1-201ENST00000263202 POP1Q99575 1024 aaKnown RBP24.63■■□□□ 1.53
UFD1-201ENST00000263202 NUP58Q9BVL2 599 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms