RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 FMR1NBQ8N0W7 255 aaPredicted RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 SMG8Q8ND04 991 aaKnown RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 LPPQ93052 612 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 TIGD1Q96MW7 591 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 FAM193BQ96PV7 902 aaPredicted RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 APOL6Q9BWW8 343 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 TMEM206Q9H813 350 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 EXOC1Q9NV70 894 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 ANKFY1Q9P2R3 1169 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 PARP2Q9UGN5 583 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 PCDHB12Q9Y5F1 795 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 LAMA3Q16787 3333 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 KINO60870 393 aaKnown RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 RB1P06400 928 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 NOLC1Q14978 699 aaKnown RBP eCLIP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 ZC2HC1CQ53FD0 456 aaPredicted RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 FAM26FQ5R3K3 315 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 AGMOQ6ZNB7 445 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 CLEC17AQ6ZS10 378 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 CLP1Q92989 425 aaKnown RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 CASD1Q96PB1 797 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 RPS6KC1Q96S38 1066 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 FIZ1Q96SL8 496 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 PLVAPQ9BX97 442 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 NXF3Q9H4D5 531 aaKnown RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 TOPORSQ9NS56 1045 aaPredicted RBP20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 INPP5FQ9Y2H2 1132 aa20.53■□□□□ 0.88
CYSTM1-201ENST00000261811 TTLL13PA6NNM8 815 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 OFD1O75665 1012 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 PIGRP01833 764 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 LAG3P18627 525 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 GATMP50440 423 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 CLLU1OSQ5K130 101 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 L1TD1Q5T7N2 865 aaKnown RBP20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 EEF1DP3Q658K8 133 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 ZBTB33Q86T24 672 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 TMEM192Q8IY95 271 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 GRAMD1CQ8IYS0 662 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 FBXO22Q8NEZ5 403 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 ARNTL2Q8WYA1 636 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 FAM161BQ96MY7 647 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 GAS2L1Q99501 681 aaPredicted RBP20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 TTYH1Q9H313 450 aaPredicted RBP20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 PTPRHQ9HD43 1115 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 USP20Q9Y2K6 914 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 HES2Q9Y543 173 aa20.52■□□□□ 0.87
CYSTM1-201ENST00000261811 PDCD11Q14690 1871 aaKnown RBP20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 EIF3DO15371 548 aaKnown RBP eCLIP20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 PRPF40AO75400 957 aaKnown RBP20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 EDN1P05305 212 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 PROZP22891 400 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 CTNNB1P35222 781 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 POSTNQ15063 836 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 ENGASEQ8NFI3 743 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 C11orf84Q9BUA3 381 aaPredicted RBP20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 CDT1Q9H211 546 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 RNF19AQ9NV58 838 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 TYW1Q9NV66 732 aaKnown RBP20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 SNTG2Q9NY99 539 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 MTUS1Q9ULD2 1270 aa20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 MRPL42Q9Y6G3 142 aaKnown RBP20.51■□□□□ 0.87
CYSTM1-201ENST00000261811 UBE4BO95155 1302 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 NR1I2O75469 434 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 PPP1R37O75864 691 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 KIF20AO95235 890 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 SMC2O95347 1197 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 RPN1P04843 607 aaKnown RBP20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 HARSP12081 509 aaKnown RBP20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 AKAP5P24588 427 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 CASP1P29466 404 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 BMPR1AP36894 532 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 GRM5P41594 1212 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 ALDH7A1P49419 539 aaKnown RBP20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 MCL1Q07820 350 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 SNW1Q13573 536 aaKnown RBP20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 EPC2Q52LR7 807 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 ACAP3Q96P50 834 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 STRA6Q9BX79 667 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 CERS4Q9HA82 394 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 RMND1Q9NWS8 449 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 GDAQ9Y2T3 454 aa20.5■□□□□ 0.87
CYSTM1-201ENST00000261811 COL4A4P53420 1690 aaPredicted RBP20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 PLXNA4Q9HCM2 1894 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 ARL5CA6NH57 179 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 MYBP10242 640 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 MLH1P40692 756 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 HSP90AA2PQ14568 343 aaPredicted RBP20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 Q7L0L9 218 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 ELOA2Q8IYF1 753 aaPredicted RBP20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 THNSL1Q8IYQ7 743 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 P2RX5Q93086 422 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 ZNF558Q96NG5 402 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 GAD1Q99259 594 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 C17orf80Q9BSJ5 609 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 GTPBP4Q9BZE4 634 aaKnown RBP20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 RNF39Q9H2S5 420 aa20.49■□□□□ 0.87
CYSTM1-201ENST00000261811 MEIS3P2A8K0S8 358 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 C5orf67F2Z3F1 127 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 INPPL1O15357 1258 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 GADD45BO75293 160 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms