RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SUN2Q9UH99 717 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 PCDHB2Q9Y5E7 798 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 TMCO5AQ8N6Q1 288 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 GBP5Q96PP8 586 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 EIF2AK1Q9BQI3 630 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 CATSPERBQ9H7T0 1116 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 KANSL3Q9P2N6 904 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 F9P00740 461 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 GZMAP12544 262 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 EHHADHQ08426 723 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 KCNQ5Q9NR82 932 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 BFARQ9NZS9 450 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 LMCD1Q9NZU5 365 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ITIH2P19823 946 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 FNTAP49354 379 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 YWHAGP61981 247 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 NAB1Q13506 487 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 TXNRD1Q16881 649 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF568Q3ZCX4 644 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 DSTYKQ6XUX3 929 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 SOCS4Q8WXH5 440 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 NMRK1Q9NWW6 199 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 DENND3A2RUS2 1198 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 MYO1DO94832 1006 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ZYXQ15942 572 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 DGKDQ16760 1214 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 MMEL1Q495T6 779 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 NOTUMQ6P988 496 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 MAGEB10Q96LZ2 347 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 SEC31BQ9NQW1 1179 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 APEX2Q9UBZ4 518 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 AGO2Q9UKV8 859 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 MEGF6O75095 1541 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 KBTBD13C9JR72 458 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 MSCO60682 206 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 NTSR2O95665 410 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 SUPT20HL2P0C7V6 817 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ANXA11P50995 505 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 SNCBQ16143 134 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ADCK5Q3MIX3 580 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 TTC23LQ6PF05 361 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 PCSK9Q8NBP7 692 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ATL2Q8NHH9 583 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 CCDC127Q96BQ5 260 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 WRNIP1Q96S55 665 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 LXNQ9BS40 222 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 MYH13Q9UKX3 1938 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 O00370 1275 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 EIF3HO15372 352 aaKnown RBP eCLIP4.58□□□□□ -1.689e-7■■■■□ 25.2
VPS13C-202ENST00000261517 CPA1P15085 419 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 GRM1Q13255 1194 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 PDK1Q15118 436 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 ZSCAN26Q16670 478 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 DPCR1Q3MIW9 517 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 EFHC1Q5JVL4 640 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 SESTD1Q86VW0 696 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 GPRC5AQ8NFJ5 357 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 TMC2Q8TDI7 906 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 IGDCC4Q8TDY8 1250 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 HEXIM2Q96MH2 286 aaKnown RBP4.58□□□□□ -1.68
VPS13C-202ENST00000261517 TRIM55Q9BYV6 548 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 TUBE1Q9UJT0 475 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 SLC13A4Q9UKG4 626 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 LOXHD1Q8IVV2 1947 aa4.58□□□□□ -1.68
VPS13C-202ENST00000261517 EFCAB14O75071 495 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 CYBBP04839 570 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 NFIXQ14938 502 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 AARS2Q5JTZ9 985 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SPATA33Q96N06 139 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 RSAD1Q9HA92 442 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 MPP6Q9NZW5 540 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SRGNP10124 158 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 GUCY2DQ02846 1103 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 UGT3A1Q6NUS8 523 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 BSNDQ8WZ55 320 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 TRIM9Q9C026 710 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 BHMT2Q9H2M3 363 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 XAB2Q9HCS7 855 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 RAD18Q9NS91 495 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 MAPK8IP1Q9UQF2 711 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 RALBP11234 206 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 IL1R1P14778 569 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 BRAFP15056 766 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 TKTP29401 623 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SATB1Q01826 763 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 MUM1Q2TAK8 710 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 AGBL2Q5U5Z8 902 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 POTEAQ6S8J7 498 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SGSM3Q96HU1 749 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 DNPEPQ9ULA0 475 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 NEDD4P46934 1319 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 APOL1O14791 398 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 CABYRO75952 493 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ABCB4P21439 1286 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 FDFT1P37268 417 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ALDH1A3P47895 512 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 PDK2Q15119 407 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 TMED2Q15363 201 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 QRICH1Q2TAL8 776 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SCYL2Q6P3W7 929 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms