RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 FBXO46Q6PJ61 603 aaPredicted RBP19.33■□□□□ 0.69
CCDC115-201ENST00000259229 CPB2Q96IY4 423 aa19.33■□□□□ 0.69
CCDC115-201ENST00000259229 CDT1Q9H211 546 aa19.33■□□□□ 0.69
CCDC115-201ENST00000259229 GINS2Q9Y248 185 aa19.33■□□□□ 0.69
CCDC115-201ENST00000259229 RNF225M0QZC1 329 aaPredicted RBP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 EPHB6O15197 1021 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 CLDN3O15551 220 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 HSPA1AP0DMV8 641 aaKnown RBP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 HSPA1BP0DMV9 641 aaKnown RBP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 EIF4BP23588 611 aaKnown RBP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 ACOT2P49753 483 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 MRPS6P82932 125 aaKnown RBP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 PPP3CAQ08209 521 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 GOLGA8FQ08AF8 430 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 MGAT3Q09327 533 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 GOLGA8DPQ0D2H9 430 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 NOLC1Q14978 699 aaKnown RBP eCLIP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 PTGISQ16647 500 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 TRIM71Q2Q1W2 868 aaKnown RBP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 CBWD6Q4V339 395 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 CBWD3Q5JTY5 395 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 CBWD5Q5RIA9 395 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 PARD3BQ8TEW8 1205 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 CACTINQ8WUQ7 758 aaKnown RBP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 ZNF333Q96JL9 665 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 RNF208Q9H0X6 261 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 KIAA1586Q9HCI6 787 aa19.33■□□□□ 0.68
CCDC115-201ENST00000259229 TRMT13Q9NUP7 481 aaKnown RBP19.33■□□□□ 0.68
CCDC115-201ENST00000259229 HARSP12081 509 aaKnown RBP19.32■□□□□ 0.68
CCDC115-201ENST00000259229 KRT13P13646 458 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 TNFSF9P41273 254 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 FMO5P49326 533 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 FXR1P51114 621 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCDC115-201ENST00000259229 CRYBB1P53674 252 aaPredicted RBP19.32■□□□□ 0.68
CCDC115-201ENST00000259229 ENPEPQ07075 957 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 RBL2Q08999 1139 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 ZNF568Q3ZCX4 644 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 SEZ6Q53EL9 994 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 HS1BP3Q53T59 392 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 ZBTB33Q86T24 672 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 ZNF710Q8N1W2 664 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 CEP120Q8N960 986 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 TC2NQ8N9U0 490 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 TMC2Q8TDI7 906 aa19.32■□□□□ 0.68
CCDC115-201ENST00000259229 A0A1B0GUA9 196 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 ZNF233A6NK53 670 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 LRRIQ3A6PVS8 624 aaPredicted RBP19.31■□□□□ 0.68
CCDC115-201ENST00000259229 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 OGTO15294 1046 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 LDHAP00338 332 aaKnown RBP19.31■□□□□ 0.68
CCDC115-201ENST00000259229 HOXA11P31270 313 aaPredicted RBP19.31■□□□□ 0.68
CCDC115-201ENST00000259229 MNX1P50219 401 aaPredicted RBP19.31■□□□□ 0.68
CCDC115-201ENST00000259229 GSDMDP57764 484 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 ARMC5Q96C12 935 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 ZNF830Q96NB3 372 aaPredicted RBP19.31■□□□□ 0.68
CCDC115-201ENST00000259229 CELF4Q9BZC1 486 aaKnown RBP19.31■□□□□ 0.68
CCDC115-201ENST00000259229 SENP6Q9GZR1 1112 aaPredicted RBP19.31■□□□□ 0.68
CCDC115-201ENST00000259229 CRISPLD2Q9H0B8 497 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 STARD7Q9NQZ5 370 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 CPSF3Q9UKF6 684 aaKnown RBP19.31■□□□□ 0.68
CCDC115-201ENST00000259229 CDY2AQ9Y6F7 541 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 RALGAPA2Q2PPJ7 1873 aa19.31■□□□□ 0.68
CCDC115-201ENST00000259229 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
CCDC115-201ENST00000259229 GTPBP10A4D1E9 387 aaKnown RBP19.3■□□□□ 0.68
CCDC115-201ENST00000259229 CHRNA1P02708 482 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 MATR3P43243 847 aaKnown RBP eCLIP19.3■□□□□ 0.68
CCDC115-201ENST00000259229 CLDN10P78369 228 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 LRMPQ12912 555 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 PTK7Q13308 1070 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 PSMD6Q15008 389 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 PCBP1Q15365 356 aaKnown RBP eCLIP19.3■□□□□ 0.68
CCDC115-201ENST00000259229 FIGNQ5HY92 759 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 VTI1AQ96AJ9 217 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 CRACR2AQ9BSW2 395 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 TOPORSQ9NS56 1045 aaPredicted RBP19.3■□□□□ 0.68
CCDC115-201ENST00000259229 AGPAT5Q9NUQ2 364 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.3■□□□□ 0.68
CCDC115-201ENST00000259229 TRPV2Q9Y5S1 764 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 PTPRJQ12913 1337 aa19.3■□□□□ 0.68
CCDC115-201ENST00000259229 MEFVO15553 781 aaPredicted RBP19.29■□□□□ 0.68
CCDC115-201ENST00000259229 B4GALT4O60513 344 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 NOL4O94818 638 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 ERLIN2O94905 339 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 CASP14P31944 242 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 CTCFP49711 727 aaPredicted RBP19.29■□□□□ 0.68
CCDC115-201ENST00000259229 APBA1Q02410 837 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 TRIM14Q14142 442 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 BRSK2Q8IWQ3 736 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 LRRC8AQ8IWT6 810 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 CCDC150Q8NCX0 1101 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 CCDC127Q96BQ5 260 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 POP1Q99575 1024 aaKnown RBP19.29■□□□□ 0.68
CCDC115-201ENST00000259229 TCHPQ9BT92 498 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 RBAKQ9NYW8 714 aaPredicted RBP19.29■□□□□ 0.68
CCDC115-201ENST00000259229 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
CCDC115-201ENST00000259229 TTC26A0AVF1 554 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 ARVCFO00192 962 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 MFAP3LO75121 409 aa19.29■□□□□ 0.68
CCDC115-201ENST00000259229 RPLP2P05387 115 aaKnown RBP19.29■□□□□ 0.68
CCDC115-201ENST00000259229 MCF2P10911 925 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms