RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ATP6V0A4Q9HBG4 840 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 TRPC6Q9Y210 931 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 PFASO15067 1338 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 ANO9A1A5B4 782 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 DDX42Q86XP3 938 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 TMEM130Q8N3G9 435 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 CAPS2Q9BXY5 557 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 KCND2Q9NZV8 630 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 ZNF112Q9UJU3 913 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 FAM169AQ9Y6X4 670 aa15.79■□□□□ 0.12
TRAFD1-201ENST00000257604 UBA1P22314 1058 aaKnown RBP15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 TCF7P36402 384 aaPredicted RBP15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 HSDL1Q3SXM5 330 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 DPY19L2Q6NUT2 758 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 OPTNQ96CV9 577 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 GPRASP2Q96D09 838 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 SYT17Q9BSW7 474 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 PDGFCQ9NRA1 345 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 ADARB2Q9NS39 739 aaKnown RBP15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 DBR1Q9UK59 544 aaKnown RBP15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 NFU1Q9UMS0 254 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 EXOC7Q9UPT5 735 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 EBAG9O00559 213 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 GRM1Q13255 1194 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 DAB2IPQ5VWQ8 1189 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 SCARA3Q6AZY7 606 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 DPH6Q7L8W6 267 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 DMAC2Q9NW81 257 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 FBXO40Q9UH90 709 aa15.78■□□□□ 0.12
TRAFD1-201ENST00000257604 TTLL13PA6NNM8 815 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 H0YHG0 523 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 SLC26A4O43511 780 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 BUB1BO60566 1050 aaPredicted RBP15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 HEXIM1O94992 359 aaKnown RBP15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 ALDH5A1P51649 535 aaPredicted RBP15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 NLRP11P59045 1033 aaKnown RBP15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 ASAP3Q8TDY4 903 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 RUFY1Q96T51 708 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 AZI2Q9H6S1 392 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 PPP1R37O75864 691 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 ERLIN2O94905 339 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 MMEP08473 750 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 ITGA4P13612 1032 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 MCM3P25205 808 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 HPDP32754 393 aaPredicted RBP15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 STAT5BP51692 787 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 THNSL1Q8IYQ7 743 aa15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 SYN2Q92777 582 aaPredicted RBP15.77■□□□□ 0.12
TRAFD1-201ENST00000257604 UPF1Q92900 1129 aaKnown RBP eCLIP15.77■□□□□ 0.124e-12■■■■□ 24
TRAFD1-201ENST00000257604 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 MYO1FO00160 1098 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 SUPT20HL2P0C7V6 817 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 CD58P19256 250 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 ATP4AP20648 1035 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 GTF2BQ00403 316 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 KCTD2Q14681 263 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 RNF187Q5TA31 235 aaPredicted RBP15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 DPY19L2P1Q6NXN4 242 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 SLC39A4Q6P5W5 647 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 SV2AQ7L0J3 742 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 NIPA1Q7RTP0 329 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 RHPN2Q8IUC4 686 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 ZC3H3Q8IXZ2 948 aaKnown RBP15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 EFCAB13Q8IY85 973 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 CDCA5Q96FF9 252 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 DPH5Q9H2P9 285 aa15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 BZW2Q9Y6E2 419 aaKnown RBP15.77■□□□□ 0.11
TRAFD1-201ENST00000257604 DGAT1O75907 488 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 ARIH2O95376 493 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 GLI1P08151 1106 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 WNT7BP56706 349 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 GUCY1A3Q02108 690 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 SCLT1Q96NL6 688 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 DOCK5Q9H7D0 1870 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 LCA5LO95447 670 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 CARSP49589 748 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 SEC24CP53992 1094 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 ABHD15Q6UXT9 468 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 AGPAT1Q99943 283 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 MKNK1Q9BUB5 465 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 CELF4Q9BZC1 486 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 RNF19AQ9NV58 838 aa15.76■□□□□ 0.11
TRAFD1-201ENST00000257604 TARSL2A2RTX5 802 aaKnown RBP15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 INO80B-WBP1J3KQ70 363 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 KRIT1O00522 736 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 XKR3Q5GH77 459 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 C1orf220Q5T0J3 134 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 TPCN2Q8NHX9 752 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 KIFAP3Q92845 792 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 MSTO1Q9BUK6 570 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 INO80BQ9C086 356 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 ANKEF1Q9NU02 776 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 CAPN7Q9Y6W3 813 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 PJA2O43164 708 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 KIF4AO95239 1232 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 FAM153BP0C7A2 387 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 JAM2P57087 298 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 PPP2R5AQ15172 486 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 FAM153CQ494X1 144 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms