RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ASAP2O43150 1006 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 TSPAN1O60635 241 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 SLITRK3O94933 977 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 PAPLNO95428 1278 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 LARGE1O95461 756 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 WEE2P0C1S8 567 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 XBP1P17861 261 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 SP100P23497 879 aaPredicted RBP11.5□□□□□ -0.57
VPS50-201ENST00000251739 AK2P54819 239 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 PTENP60484 403 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
VPS50-201ENST00000251739 POU5F1BQ06416 359 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 BMS1Q14692 1282 aaKnown RBP11.5□□□□□ -0.57
VPS50-201ENST00000251739 PCBP1Q15365 356 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS50-201ENST00000251739 AMHR2Q16671 573 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 RARS2Q5T160 578 aaKnown RBP11.5□□□□□ -0.57
VPS50-201ENST00000251739 KANK3Q6NY19 840 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 SLFN12Q8IYM2 578 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 UBALD2Q8IYN6 164 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 ZDHHC14Q8IZN3 488 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 KRI1Q8N9T8 703 aaKnown RBP11.5□□□□□ -0.57
VPS50-201ENST00000251739 RNF149Q8NC42 400 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 TCP11Q8WWU5 503 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 GTF3C6Q969F1 213 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 CCDC51Q96ER9 411 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 RIPOR3Q96MK2 946 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 HSD17B14Q9BPX1 270 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 TMEM175Q9BSA9 504 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 MARCH5Q9NX47 278 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 ORC3Q9UBD5 711 aaPredicted RBP11.5□□□□□ -0.57
VPS50-201ENST00000251739 STK39Q9UEW8 545 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 ZMYM2Q9UBW7 1377 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 TRIP11Q15643 1979 aa11.5□□□□□ -0.57
VPS50-201ENST00000251739 VWA8A3KMH1 1905 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 CNPP09543 421 aaKnown RBP11.49□□□□□ -0.57
VPS50-201ENST00000251739 SRGAP2CP0DJJ0 459 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 AVPR2P30518 371 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 CLCN4P51793 760 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 MTMR3Q13615 1198 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 CTTNQ14247 550 aaKnown RBP11.49□□□□□ -0.57
VPS50-201ENST00000251739 XKR9Q5GH70 373 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 NCAPH2Q6IBW4 605 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 GPR149Q86SP6 731 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 METTL3Q86U44 580 aaKnown RBP11.49□□□□□ -0.57
VPS50-201ENST00000251739 PPFIBP1Q86W92 1011 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 COLGALT2Q8IYK4 626 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 TDRD5Q8NAT2 981 aaKnown RBP11.49□□□□□ -0.57
VPS50-201ENST00000251739 CNNM3Q8NE01 707 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 URGCPQ8TCY9 931 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 ASAP3Q8TDY4 903 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 KLHL5Q96PQ7 755 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 EIF2AQ9BY44 585 aaKnown RBP11.49□□□□□ -0.57
VPS50-201ENST00000251739 NFKBIZQ9BYH8 718 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 GBP3Q9H0R5 595 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 SFXN1Q9H9B4 322 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 KANSL3Q9P2N6 904 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 IPPQ9Y573 584 aa11.49□□□□□ -0.57
VPS50-201ENST00000251739 ARL5CA6NH57 179 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 NRP1O14786 923 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 SOD2P04179 222 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 AXLP30530 894 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 KRT2P35908 639 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 ARL2P36404 184 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 MBTD1Q05BQ5 628 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 CAPSQ13938 189 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 MXD4Q14582 209 aaPredicted RBP11.48□□□□□ -0.57
VPS50-201ENST00000251739 ANKRD1Q15327 319 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 ME3Q16798 604 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 ATAT1Q5SQI0 421 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 NOTUMQ6P988 496 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 OTUD6AQ7L8S5 288 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 NSUN7Q8NE18 718 aaKnown RBP11.48□□□□□ -0.57
VPS50-201ENST00000251739 GSTCDQ8NEC7 633 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 CMASQ8NFW8 434 aaPredicted RBP11.48□□□□□ -0.57
VPS50-201ENST00000251739 WASF1Q92558 559 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 MTRQ99707 1265 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 EIF2AK1Q9BQI3 630 aaKnown RBP11.48□□□□□ -0.57
VPS50-201ENST00000251739 HERC2P3Q9BVR0 1158 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 RHOBTB2Q9BYZ6 727 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 SMOC2Q9H3U7 446 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 UBN1Q9NPG3 1134 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 ANKEF1Q9NU02 776 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 EP300Q09472 2414 aaPredicted RBP11.48□□□□□ -0.57
VPS50-201ENST00000251739 CACNA1AO00555 2505 aa11.48□□□□□ -0.57
VPS50-201ENST00000251739 DGAT1O75907 488 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 ERLIN2O94905 339 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 POMCP01189 267 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 ASGR2P07307 311 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 ARF4P18085 180 aaPredicted RBP11.47□□□□□ -0.57
VPS50-201ENST00000251739 CA8P35219 290 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 RARRES1P49788 294 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 ST3GAL1Q11201 340 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 KIAA0319Q5VV43 1072 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 TMC5Q6UXY8 1006 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 C15orf39Q6ZRI6 1047 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 ZBTB33Q86T24 672 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 CABP7Q86V35 215 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 NECAB1Q8N987 351 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms