RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SCYL3Q8IZE3 742 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 TAS1R2Q8TE23 839 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 SLC16A10Q8TF71 515 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 LRRC45Q96CN5 670 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 ATP6V1G3Q96LB4 118 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 FBXL18Q96ME1 805 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 RABEP2Q9H5N1 569 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 TMEM8AQ9HCN3 771 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 ZNF214Q9UL59 606 aaPredicted RBP21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 UTP11Q9Y3A2 253 aaKnown RBP21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 MYO1CO00159 1063 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 GZMAP12544 262 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 GPC3P51654 580 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 MFAP3P55082 362 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 KDM7AQ6ZMT4 941 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 ZNF280CQ8ND82 737 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 C1orf131Q8NDD1 294 aaKnown RBP21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 ATP8B4Q8TF62 1192 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 SPIRE2Q8WWL2 714 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 KIFAP3Q92845 792 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 MFSD14AQ96MC6 490 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 TRIM31Q9BZY9 425 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 PTPRAP18433 802 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 HMGCS2P54868 508 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 TGFB2P61812 414 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 SP4Q02446 784 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 MESDQ14696 234 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 SWSAP1Q6NVH7 229 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 LRIG3Q6UXM1 1119 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 OTUD6AQ7L8S5 288 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 TMBIM4Q9HC24 238 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 PDLIM7Q9NR12 457 aa21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 CNOT7Q9UIV1 285 aaKnown RBP21.04■□□□□ 0.96
CDC42EP1-201ENST00000249014 SORBS3O60504 671 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 CYP11B1P15538 503 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 COMTP21964 271 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 IRX5P78411 483 aaPredicted RBP21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 DR1Q01658 176 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 TMC3Q7Z5M5 1100 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 POMGNT1Q8WZA1 660 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 DHX38Q92620 1227 aaKnown RBP21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 GLG1Q92896 1179 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 FAM84AQ96KN4 292 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 NAP1L3Q99457 506 aaPredicted RBP21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 ZSWIM1Q9BR11 485 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 XPNPEP1Q9NQW7 623 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 MIF4GDA9UHW6 222 aaKnown RBP21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 MAFGO15525 162 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 MTA2O94776 668 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 NR1D1P20393 614 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 CTNNA1P35221 906 aaKnown RBP21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 CYP24A1Q07973 514 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 SF3B2Q13435 895 aaKnown RBP21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 TMEM132BQ14DG7 1078 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 EMC10Q5UCC4 262 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 CPNE8Q86YQ8 564 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 CCDC60Q8IWA6 550 aaPredicted RBP21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 FBXL13Q8NEE6 735 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 TMC2Q8TDI7 906 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 BCAS4Q8TDM0 211 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 NSUN6Q8TEA1 469 aaKnown RBP21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 ATP6V0A1Q93050 837 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 WRNIP1Q96S55 665 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 C17orf75Q9HAS0 396 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 FAM114A2Q9NRY5 505 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 RAB20Q9NX57 234 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 ZNF112Q9UJU3 913 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 ADAMTS5Q9UNA0 930 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 GJA3Q9Y6H8 435 aa21.03■□□□□ 0.96
CDC42EP1-201ENST00000249014 TRIM66O15016 1216 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 DSG3P32926 999 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 PEX5P50542 639 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 ZNF844Q08AG5 666 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 SV2AQ7L0J3 742 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 TAS1R3Q7RTX0 852 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 ZDHHC14Q8IZN3 488 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 UBLCP1Q8WVY7 318 aaPredicted RBP21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 TATDN2Q93075 761 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 BTBD6Q96KE9 485 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 MYH9P35579 1960 aaKnown RBP21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 SYNGAP1Q96PV0 1343 aa21.02■□□□□ 0.96
CDC42EP1-201ENST00000249014 GOLGA6L10A0A0M3HER8 536 aa21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 HMGB1P1B2RPK0 211 aaPredicted RBP21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 DLATP10515 647 aaKnown RBP21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 UBL4BQ8N7F7 174 aa21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 DDX1Q92499 740 aaKnown RBP21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 NT5C1BQ96P26 610 aa21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 RPS6KC1Q96S38 1066 aa21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 JPH1Q9HDC5 661 aaPredicted RBP21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 SEPT9Q9UHD8 586 aaPredicted RBP21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 TRPC6Q9Y210 931 aa21.02■□□□□ 0.95
CDC42EP1-201ENST00000249014 LCTP09848 1927 aa21.01■□□□□ 0.95
CDC42EP1-201ENST00000249014 HNRNPDLO14979 420 aaKnown RBP21.01■□□□□ 0.95
CDC42EP1-201ENST00000249014 PSAPP07602 524 aa21.01■□□□□ 0.95
CDC42EP1-201ENST00000249014 CCT5P48643 541 aa21.01■□□□□ 0.95
CDC42EP1-201ENST00000249014 DCAF15Q66K64 600 aa21.01■□□□□ 0.95
CDC42EP1-201ENST00000249014 DUPD1Q68J44 220 aa21.01■□□□□ 0.95
CDC42EP1-201ENST00000249014 CD101Q93033 1021 aa21.01■□□□□ 0.95
CDC42EP1-201ENST00000249014 NUP85Q9BW27 656 aa21.01■□□□□ 0.95
CDC42EP1-201ENST00000249014 RAB17Q9H0T7 212 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms