RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 CPNE8Q86YQ8 564 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 PROM2Q8N271 834 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 SLC35G2Q8TBE7 412 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 FAM213AQ9BRX8 229 aa12.33□□□□□ -0.44
SOX9-201ENST00000245479 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
SOX9-201ENST00000245479 SLIT2O94813 1529 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 ATF2P15336 505 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 FERP16591 822 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 RCN2Q14257 317 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 CBWD6Q4V339 395 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 CBWD3Q5JTY5 395 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 CBWD5Q5RIA9 395 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 METTL13Q8N6R0 699 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 IL31RAQ8NI17 732 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 ZFATQ9P243 1243 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 AJAP1Q9UKB5 411 aaPredicted RBP12.32□□□□□ -0.44
SOX9-201ENST00000245479 MYH8P13535 1937 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 FOXO6A8MYZ6 492 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 TRAPPC3O43617 180 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 GJB6O95452 261 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 ECEL1O95672 775 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 CA4P22748 312 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 YY1P25490 414 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 SWSAP1Q6NVH7 229 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 ANKS1AQ92625 1134 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 RILPQ96NA2 401 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 CYTH2Q99418 400 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 LAMA4Q16363 1823 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 CAND2O75155 1236 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 SRGAP2CP0DJJ0 459 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 LMNB1P20700 586 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 HMGCS2P54868 508 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 SH3BGRP55822 239 aaPredicted RBP12.32□□□□□ -0.44
SOX9-201ENST00000245479 MRPS35P82673 323 aaKnown RBP12.32□□□□□ -0.44
SOX9-201ENST00000245479 MTMR1Q13613 665 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 KIAA1755Q5JYT7 1200 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 TAAR1Q96RJ0 339 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 EHMT1Q9H9B1 1298 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 NAGPAQ9UK23 515 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 PPP1R9AQ9ULJ8 1098 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 MRPL11Q9Y3B7 192 aaKnown RBP12.32□□□□□ -0.44
SOX9-201ENST00000245479 CEP350Q5VT06 3117 aa12.32□□□□□ -0.44
SOX9-201ENST00000245479 F5H423 210 aaPredicted RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 PI4K2BG5E9Z4 385 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 BCRP11274 1271 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 DYNC1I2Q13409 638 aaKnown RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 ORC1Q13415 861 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
SOX9-201ENST00000245479 TTC16Q8NEE8 873 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 CPA5Q8WXQ8 436 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 TMEM143Q96AN5 459 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 UNC45AQ9H3U1 944 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 TYW1Q9NV66 732 aaKnown RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 GOLGA8SH3BPF8 625 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 GOLGA8MH3BSY2 632 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 PSEN1P49768 467 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 MXI1P50539 228 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 PAPOLAP51003 745 aaKnown RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 PRUNE1Q86TP1 453 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 CBWD2Q8IUF1 395 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 DAGLBQ8NCG7 672 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 NAF1Q96HR8 494 aaKnown RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 SYNCQ9H7C4 482 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 KCNH7Q9NS40 1196 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 COL4A1P02462 1669 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 ATP5HO75947 161 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 AGTP01019 485 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 COPS2P61201 443 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 SLC29A2Q14542 456 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 ACCSLQ4AC99 568 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 THEMIS2Q5TEJ8 643 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 BAP1Q92560 729 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 NACC1Q96RE7 527 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 WDR18Q9BV38 432 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 ASTN2O75129 1339 aaPredicted RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 MYH14Q7Z406 1995 aaKnown RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 DCTN3O75935 186 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 HSPA9P38646 679 aaKnown RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 SGO2Q562F6 1265 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 AGAP11Q8TF27 550 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 ATG4AQ8WYN0 398 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 GABBR1Q9UBS5 961 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 NXF1Q9UBU9 619 aaKnown RBP12.31□□□□□ -0.44
SOX9-201ENST00000245479 NR2E1Q9Y466 385 aa12.31□□□□□ -0.44
SOX9-201ENST00000245479 A0A1W2PQJ5 194 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 DENND3A2RUS2 1198 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 RASA4BC9J798 803 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 M0R2N6 131 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 PODXLO00592 558 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 GYG2O15488 501 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 RASA4O43374 803 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 RPA1P27694 616 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 CCNHP51946 323 aaPredicted RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 ZNF844Q08AG5 666 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 NAB2Q15742 525 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms