RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 WDR46O15213 610 aaKnown RBP21.08■□□□□ 0.97
SOX4-201ENST00000244745 PTPAQ15257 358 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 NAB2Q15742 525 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 SWSAP1Q6NVH7 229 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 GPD1LQ8N335 351 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 VPS11Q9H270 941 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 ALG13Q9NP73 1137 aaKnown RBP21.08■□□□□ 0.97
SOX4-201ENST00000244745 EHD2Q9NZN4 543 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 M0QYV0 167 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 MCF2P10911 925 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 SMAD1Q15797 465 aaKnown RBP21.08■□□□□ 0.97
SOX4-201ENST00000244745 TRIM67Q6ZTA4 783 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 FUT8Q9BYC5 575 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 QTRT2Q9H974 415 aaKnown RBP21.08■□□□□ 0.97
SOX4-201ENST00000244745 APEX2Q9UBZ4 518 aa21.08■□□□□ 0.97
SOX4-201ENST00000244745 TBXAS1P24557 533 aaPredicted RBP21.08■□□□□ 0.96
SOX4-201ENST00000244745 SLC30A5Q8TAD4 765 aa21.08■□□□□ 0.96
SOX4-201ENST00000244745 STK33Q9BYT3 514 aa21.08■□□□□ 0.96
SOX4-201ENST00000244745 ARL2BPQ9Y2Y0 163 aa21.08■□□□□ 0.96
SOX4-201ENST00000244745 BYSLQ13895 437 aaKnown RBP21.07■□□□□ 0.96
SOX4-201ENST00000244745 ZBBXA8MT70 800 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 ROR1Q01973 937 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 LMBRD2Q68DH5 695 aaPredicted RBP21.07■□□□□ 0.96
SOX4-201ENST00000244745 FNDC3AQ9Y2H6 1198 aaKnown RBP21.07■□□□□ 0.96
SOX4-201ENST00000244745 MKRN3Q13064 507 aaKnown RBP21.07■□□□□ 0.96
SOX4-201ENST00000244745 TFDP2Q14188 446 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 ARHGAP27Q6ZUM4 889 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 BZW1Q7L1Q6 419 aaKnown RBP21.07■□□□□ 0.96
SOX4-201ENST00000244745 GRAMD1AQ96CP6 724 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 DDX56Q9NY93 547 aaKnown RBP21.07■□□□□ 0.96
SOX4-201ENST00000244745 PSMC1P62191 440 aaKnown RBP21.07■□□□□ 0.96
SOX4-201ENST00000244745 KRT76Q01546 638 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 MMGT1Q8N4V1 131 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 ASNSP08243 561 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 TRMT10CQ7L0Y3 403 aaKnown RBP21.07■□□□□ 0.96
SOX4-201ENST00000244745 LONP2Q86WA8 852 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 TEX9Q8N6V9 391 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 ADAM33Q9BZ11 813 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 TUFT1Q9NNX1 390 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 CYP26B1Q9NR63 512 aa21.07■□□□□ 0.96
SOX4-201ENST00000244745 PLEKP08567 350 aaPredicted RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 MKRN4PQ13434 485 aaPredicted RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 TAF1BQ53T94 588 aaPredicted RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 FSCBQ5H9T9 825 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 RASSF3Q86WH2 238 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 DDX42Q86XP3 938 aaKnown RBP eCLIP21.06■□□□□ 0.96
SOX4-201ENST00000244745 ORC6Q9Y5N6 252 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 SLC9A1P19634 815 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 PTGISQ16647 500 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 SLC30A9Q6PML9 568 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 NRBF2Q96F24 287 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 CELF4Q9BZC1 486 aaKnown RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 SEC24CP53992 1094 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 ZNF568Q3ZCX4 644 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 SBK1Q52WX2 424 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 RWDD4Q6NW29 188 aaKnown RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 C1orf228Q6PIY5 440 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 ARHGEF1Q92888 912 aaKnown RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 EPHB1P54762 984 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 KIF19Q2TAC6 998 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 AGBL2Q5U5Z8 902 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 ATP11CQ8NB49 1132 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 ZNF302Q9NR11 478 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 TMEM154Q6P9G4 183 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 CYFIP1Q7L576 1253 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 FBXL13Q8NEE6 735 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 XPO6Q96QU8 1125 aaKnown RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 PARVAQ9NVD7 372 aa21.06■□□□□ 0.96
SOX4-201ENST00000244745 KLHL8Q9P2G9 620 aaPredicted RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 TRPC5Q9UL62 973 aaPredicted RBP21.06■□□□□ 0.96
SOX4-201ENST00000244745 SCP2P22307 547 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 FMO5P49326 533 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 INPP1P49441 399 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 KLC3Q6P597 504 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 HAUS6Q7Z4H7 955 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 CLEC10AQ8IUN9 316 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 SLC9A2Q9UBY0 812 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 BBS5Q8N3I7 341 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 ICA1LQ8NDH6 482 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.05■□□□□ 0.96
SOX4-201ENST00000244745 FRMPD1Q5SYB0 1578 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 FLT1P17948 1338 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 PSMC5P62195 406 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 USP38Q8NB14 1042 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 ZMAT2Q96NC0 199 aaKnown RBP21.05■□□□□ 0.96
SOX4-201ENST00000244745 TRABDQ9H4I3 376 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 SFNP31947 248 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 COPS2P61201 443 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 OCRLQ01968 901 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 STAT4Q14765 748 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 ARL13BQ3SXY8 428 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 CPA5Q8WXQ8 436 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 GOLPH3Q9H4A6 298 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 MTMR4Q9NYA4 1195 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 HSPBP1Q9NZL4 362 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 PIK3C2BO00750 1634 aa21.05■□□□□ 0.96
SOX4-201ENST00000244745 ABCA9Q8IUA7 1624 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 TSTA3Q13630 321 aaPredicted RBP21.04■□□□□ 0.96
SOX4-201ENST00000244745 ITSN1Q15811 1721 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms