RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 DGKHQ86XP1 1220 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 TEX2Q8IWB9 1127 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 FAM32AQ9Y421 112 aaKnown RBP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 SPATA31E1Q6ZUB1 1445 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 CITO14578 2027 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 FAM47DPA6NHR8 397 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 SPAG6O75602 509 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 CSPG5O95196 566 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 BRAFP15056 766 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 BYSLQ13895 437 aaKnown RBP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 CATSPER4Q7RTX7 472 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 ELMOD1Q8N336 334 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 RNPC3Q96LT9 517 aaKnown RBP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 HEMGNQ9BXL5 484 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 CCDC134Q9H6E4 229 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 GDAQ9Y2T3 454 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 USP15Q9Y4E8 981 aaPredicted RBP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 NEO1Q92859 1461 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 EIF3HO15372 352 aaKnown RBP eCLIP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 MEFVO15553 781 aaPredicted RBP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 SH3GL2Q99962 352 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 SFNP31947 248 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 ALDH18A1P54886 795 aaKnown RBP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 PRAMEP78395 509 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 POU5F1BQ06416 359 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 CYTH1Q15438 398 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 SUPT20HL1Q3ZLR7 823 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 ANKS3Q6ZW76 656 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 TRIM69Q86WT6 500 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 NLGN1Q8N2Q7 840 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 TEKT4Q8WW24 435 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 C11orf70Q9BRQ4 267 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 TSSK1BQ9BXA7 367 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 PLEKHG3A1L390 1219 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 ZBTB22O15209 634 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 SLC1A1P43005 524 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 FBXW4P57775 412 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 OSTNP61366 133 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 KCNH2Q12809 1159 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 LAMB3Q13751 1172 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 KNOP1Q1ED39 458 aaKnown RBP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 PROSER3Q2NL68 480 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 PASD1Q8IV76 773 aa7.13□□□□□ -1.27
CSMD2-201ENST00000241312 PUS3Q9BZE2 481 aaKnown RBP7.13□□□□□ -1.27
CSMD2-201ENST00000241312 AP3B1O00203 1094 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 HUS1O60921 280 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ELF1P32519 619 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 NLRP4Q96MN2 994 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 PPP1R2P1Q96PQ5 205 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 AIPL1Q9NZN9 384 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ZC3H7BQ9UGR2 993 aaKnown RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 MAD2L2Q9UI95 211 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 PREX2Q70Z35 1606 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF263O14978 683 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 CLDN3O15551 220 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 STAT3P40763 770 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 DRAP1Q14919 205 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 EFHBQ8N7U6 833 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ZCCHC17Q9NP64 241 aaKnown RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ZHX2Q9Y6X8 837 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ITSN1Q15811 1721 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ADCY10Q96PN6 1610 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 IMPDH2P12268 514 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 FGFR4P22455 802 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KDSRQ06136 332 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 OR6B3Q8NGW1 331 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 OR6P1Q8NGX9 317 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 TSC22D4Q9Y3Q8 395 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 MORC2Q9Y6X9 1032 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KRR1Q13601 381 aaKnown RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KRT72Q14CN4 511 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KYAT1Q16773 422 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 RFX8Q6ZV50 586 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 STAG2Q8N3U4 1231 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 SGSM3Q96HU1 749 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 FOXP3Q9BZS1 431 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 PITPNM2Q9BZ72 1349 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 F5H423 210 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 TOMM70O94826 608 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KRT17Q04695 432 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 GOLPH3LQ9H4A5 285 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ZBTB12Q9Y330 459 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 CEP170Q5SW79 1584 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 HECW2Q9P2P5 1572 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 DSG1Q02413 1049 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 IZUMO3Q5VZ72 239 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 TMEM179Q6ZVK1 233 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 RAB42Q8N4Z0 105 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 TERB1Q8NA31 727 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KRT35Q92764 455 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 CYP2D7A0A087X1C5 515 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 PPP1R37O75864 691 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 MARK3P27448 753 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ERFP50548 548 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KCNQ4P56696 695 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 WASHC5Q12768 1159 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 C6orf10Q5SRN2 563 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 CENPPQ6IPU0 288 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 THEM5Q8N1Q8 247 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms