RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 TRPV1Q8NER1 839 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 SCG3Q8WXD2 468 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 ZNF333Q96JL9 665 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 MBOAT7Q96N66 472 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CORO1BQ9BR76 489 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TRIM56Q9BRZ2 755 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 UBAC1Q9BSL1 405 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 UPF3AQ9H1J1 476 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 RETREG1Q9H6L5 497 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 KAT14Q9H8E8 782 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 PIDD1Q9HB75 910 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 OSGEPQ9NPF4 335 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 SH3GLB2Q9NR46 395 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CYP39A1Q9NYL5 469 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 MYO1AQ9UBC5 1043 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CPA4Q9UI42 421 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 FRMPD2Q68DX3 1309 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 SOWAHBA6NEL2 793 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TMEM232C9JQI7 657 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 STRNO43815 780 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 HIP1RO75146 1068 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 URI1O94763 535 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 PARP1P09874 1014 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 EZRP15311 586 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 GUCY2FP51841 1108 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 NFKB2Q00653 900 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 MLC1Q15049 377 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 ME3Q16798 604 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 HYIQ5T013 277 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 FBXL19Q6PCT2 694 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 IGF2-ASQ6U949 168 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 MICALCLQ6ZW33 695 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 RSRC2Q7L4I2 434 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 CTU1Q7Z7A3 348 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 FAM114A1Q8IWE2 563 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 ETFBKMTQ8IXQ9 262 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TRMT44Q8IYL2 757 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 ANKRD13CQ8N6S4 541 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CEP112Q8N8E3 955 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 NSUN7Q8NE18 718 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 NPLOC4Q8TAT6 608 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CD99L2Q8TCZ2 262 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CHURC1Q8WUH1 139 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 NELL2Q99435 816 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 RNF26Q9BY78 433 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 SLC40A1Q9NP59 571 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 KCND1Q9NSA2 647 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 PCMTD2Q9NV79 361 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 MKS1Q9NXB0 559 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 BARHL2Q9NY43 387 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 OBP2AQ9NY56 170 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 GABRQQ9UN88 632 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 SPO11Q9Y5K1 396 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CYP46A1Q9Y6A2 500 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 PFASO15067 1338 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 ERICH2A1L162 156 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TMEM221A6NGB7 291 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 KLRF2D3W0D1 207 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 HRO43593 1189 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 E2F6O75461 281 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TRPA1O75762 1119 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 FLOT1O75955 427 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 KRT38O76015 456 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 MMEP08473 750 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 ZNF865P0CJ78 1059 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 STIP1P31948 543 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 FLT3P36888 993 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 LBX1P52954 281 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 FCGRTP55899 365 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 NSUN2Q08J23 767 aaKnown RBP eCLIP3.97□□□□□ -1.77
UFM1-201ENST00000239878 KRT72Q14CN4 511 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 SNCBQ16143 134 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CCDC40Q4G0X9 1142 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CATIPQ7Z7H3 387 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 RALYLQ86SE5 291 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 FAM71BQ8TC56 605 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 EPS8L3Q8TE67 593 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 AFAP1L1Q8TED9 768 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TRIB2Q92519 343 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 KIFC2Q96AC6 838 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TIFAQ96CG3 184 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 MYO19Q96H55 970 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 AGBL1Q96MI9 1066 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 LLPHQ9BRT6 129 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 C2orf49Q9BVC5 232 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 NOC4LQ9BVI4 516 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 ZMYND12Q9H0C1 365 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TSPAN10Q9H1Z9 355 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 BATF3Q9NR55 127 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 FAM8A1Q9UBU6 413 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 LNPEPQ9UIQ6 1025 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 TANC1Q9C0D5 1861 aa3.96□□□□□ -1.77
UFM1-201ENST00000239878 SIP14410 1827 aa3.96□□□□□ -1.78
UFM1-201ENST00000239878 KLF18A0A0U1RQI7 1052 aa3.96□□□□□ -1.78
UFM1-201ENST00000239878 DYTNA2CJ06 578 aa3.96□□□□□ -1.78
UFM1-201ENST00000239878 EIF4E1BA6NMX2 242 aaKnown RBP3.96□□□□□ -1.78
UFM1-201ENST00000239878 RBAK-RBAKDNI3L0D1 243 aa3.96□□□□□ -1.78
UFM1-201ENST00000239878 ADCY6O43306 1168 aa3.96□□□□□ -1.78
UFM1-201ENST00000239878 SHOX2O60902 331 aaPredicted RBP3.96□□□□□ -1.78
UFM1-201ENST00000239878 RNF40O75150 1001 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms