RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 GARTP22102 1010 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 CCNE1P24864 410 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 PMS1P54277 932 aaKnown RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 TYRO3Q06418 890 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 SHHQ15465 462 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 ZNF568Q3ZCX4 644 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 SEZ6Q53EL9 994 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 PSRC1Q6PGN9 363 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 APBB1IPQ7Z5R6 666 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 MRPL10Q7Z7H8 261 aaKnown RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 ECHDC2Q86YB7 292 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 THNSL1Q8IYQ7 743 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 CRIPAKQ8N1N5 446 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 SMG8Q8ND04 991 aaKnown RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 ZSWIM2Q8NEG5 633 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 GOLGA5Q8TBA6 731 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 NELFBQ8WX92 580 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 P2RX5Q93086 422 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 MED15Q96RN5 788 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 CBWD1Q9BRT8 395 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 MSTO1Q9BUK6 570 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 UBE2OQ9C0C9 1292 aaKnown RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 AGPAT3Q9NRZ7 376 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 TYW1Q9NV66 732 aaKnown RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 ANO10Q9NW15 660 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 DMAC2Q9NW81 257 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 CXXC1Q9P0U4 656 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 AGO2Q9UKV8 859 aaKnown RBP11.11□□□□□ -0.63
HMGCL-201ENST00000235958 TRAF3IP3Q9Y228 551 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 HES2Q9Y543 173 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 PCDHB7Q9Y5E2 793 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 ZMYM2Q9UBW7 1377 aa11.11□□□□□ -0.63
HMGCL-201ENST00000235958 MEIS3P2A8K0S8 358 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 ZBBXA8MT70 800 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 CALUO43852 315 aaPredicted RBP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 UPP2O95045 317 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 STAG3L1P0CL83 205 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 CCDC192P0DO97 292 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 HARSP12081 509 aaKnown RBP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 ACOT2P49753 483 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 CYP2J2P51589 502 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 STX17P56962 302 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 OSTNP61366 133 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 WDR5P61964 334 aaKnown RBP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 NOLC1Q14978 699 aaKnown RBP eCLIP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 STX1AQ16623 288 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 DCAF4L1Q3SXM0 396 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 CT47A1Q5JQC4 288 aaPredicted RBP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 C9orf50Q5SZB4 431 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 ARMCX5Q6P1M9 558 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 ZNF598Q86UK7 904 aaKnown RBP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 C12orf56Q8IXR9 622 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 CEP120Q8N960 986 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 RNF169Q8NCN4 708 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 TMEM174Q8WUU8 243 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 LPPQ93052 612 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 TOP1MTQ969P6 601 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 EEF2KMTQ96G04 330 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 ACAP3Q96P50 834 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 DUSP9Q99956 384 aaKnown RBP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 FUCA2Q9BTY2 467 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 ELAC1Q9H777 363 aaKnown RBP11.1□□□□□ -0.63
HMGCL-201ENST00000235958 SNTG2Q9NY99 539 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 HSPBP1Q9NZL4 362 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 DACH1Q9UI36 760 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 CTNND2Q9UQB3 1225 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 IPPQ9Y573 584 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 SLC4A7Q9Y6M7 1214 aa11.1□□□□□ -0.63
HMGCL-201ENST00000235958 BICDL2A1A5D9 508 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 GOLGA8IPA6NC78 632 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 TRIM49BA6NDI0 452 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 GOLGA8JA6NMD2 632 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 KIAA0391O15091 583 aaKnown RBP11.09□□□□□ -0.63
HMGCL-201ENST00000235958 FAM189A1O60320 539 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 LDHAP00338 332 aaKnown RBP11.09□□□□□ -0.63
HMGCL-201ENST00000235958 AMHP03971 560 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 NR3C1P04150 777 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 CLTAP09496 248 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 ITGA4P13612 1032 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 ATF7P17544 494 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-201ENST00000235958 AKAP5P24588 427 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 RPL13P26373 211 aaKnown RBP11.09□□□□□ -0.63
HMGCL-201ENST00000235958 ERCC5P28715 1186 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-201ENST00000235958 BMP8BP34820 402 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 GRM5P41594 1212 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 KCNJ6P48051 423 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 RAB27AP51159 221 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 DEFB103AP81534 67 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 LRRC63Q05C16 580 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 PAK1Q13153 545 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 ADAM9Q13443 819 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 MYBPC2Q14324 1141 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 NFIL3Q16649 462 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 EDRF1Q3B7T1 1238 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 ZCWPW2Q504Y3 356 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 RASIP1Q5U651 963 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 TTI2Q6NXR4 508 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms