RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MAPK7Q13164 816 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 GIT2Q14161 759 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 NAALADL2Q58DX5 795 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 SLC27A1Q6PCB7 646 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 FAM178BQ8IXR5 827 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 CCDC65Q8IXS2 484 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 CMTR2Q8IYT2 770 aaKnown RBP12.4□□□□□ -0.42
SF3B6-201ENST00000233468 DAW1Q8N136 415 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 RNF169Q8NCN4 708 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 DDX12PQ92771 950 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 C1QTNF1Q9BXJ1 281 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 MRPL9Q9BYD2 267 aaKnown RBP12.4□□□□□ -0.42
SF3B6-201ENST00000233468 MRPL4Q9BYD3 311 aaKnown RBP12.4□□□□□ -0.42
SF3B6-201ENST00000233468 TMEM117Q9H0C3 514 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 AAASQ9NRG9 546 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 LMCD1Q9NZU5 365 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
SF3B6-201ENST00000233468 ADGRA3Q8IWK6 1321 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 SLC16A4O15374 487 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 MYL1P05976 194 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 MAPTP10636 758 aaKnown RBP12.39□□□□□ -0.43
SF3B6-201ENST00000233468 ARF4P18085 180 aaPredicted RBP12.39□□□□□ -0.43
SF3B6-201ENST00000233468 SYKP43405 635 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 AMHR2Q16671 573 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 DCAF4L1Q3SXM0 396 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 GLB1LQ6UWU2 654 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 STXBP4Q6ZWJ1 553 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 DYMQ7RTS9 669 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 CRIPAKQ8N1N5 446 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.39□□□□□ -0.43
SF3B6-201ENST00000233468 MRPS27Q92552 414 aaKnown RBP12.39□□□□□ -0.43
SF3B6-201ENST00000233468 KCNN1Q92952 543 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 ZNF689Q96CS4 500 aaPredicted RBP12.39□□□□□ -0.43
SF3B6-201ENST00000233468 DDX27Q96GQ7 796 aaKnown RBP12.39□□□□□ -0.43
SF3B6-201ENST00000233468 IPO9Q96P70 1041 aaKnown RBP12.39□□□□□ -0.43
SF3B6-201ENST00000233468 CCDC113Q9H0I3 377 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 UBE2ZQ9H832 354 aaPredicted RBP12.39□□□□□ -0.43
SF3B6-201ENST00000233468 POLD4Q9HCU8 107 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 KBTBD4Q9NVX7 518 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 KANSL3Q9P2N6 904 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
SF3B6-201ENST00000233468 RALGAPA2Q2PPJ7 1873 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 A0A087X0B3 334 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 NPHP3-ACAD11A0A0J9YXS1 232 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 MYMKA6NI61 221 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 TBKBP1A7MCY6 615 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 K7ENM7 598 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 RB1P06400 928 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 SLFN14P0C7P3 912 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 ITGA4P13612 1032 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 IDEP14735 1019 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 IL9P15248 144 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 PFKFB1P16118 471 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 KCNA5P22460 613 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 NCKAP1LP55160 1127 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 ALCAMQ13740 583 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 E2F4Q16254 413 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 HERC4Q5GLZ8 1057 aaPredicted RBP12.38□□□□□ -0.43
SF3B6-201ENST00000233468 SPOUT1Q5T280 376 aaKnown RBP12.38□□□□□ -0.43
SF3B6-201ENST00000233468 ATF7IP2Q5U623 682 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 KANK3Q6NY19 840 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 HAUS6Q7Z4H7 955 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 MRPL10Q7Z7H8 261 aaKnown RBP12.38□□□□□ -0.43
SF3B6-201ENST00000233468 ZNF598Q86UK7 904 aaKnown RBP12.38□□□□□ -0.43
SF3B6-201ENST00000233468 LRRC43Q8N309 656 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 TMEM161BQ8NDZ6 487 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 URGCPQ8TCY9 931 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 FAM122AQ96E09 287 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 CPB2Q96IY4 423 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 HS3ST6Q96QI5 342 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 TCHPQ9BT92 498 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 KIFC3Q9BVG8 833 aa12.38□□□□□ -0.43
SF3B6-201ENST00000233468 FAM237AA0A1B0GTK4 181 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 ASIC1P78348 528 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 EPC2Q52LR7 807 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 CNNM4Q6P4Q7 775 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 LRRC15Q8TF66 581 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 CCDC47Q96A33 483 aaKnown RBP12.37□□□□□ -0.43
SF3B6-201ENST00000233468 HVCN1Q96D96 273 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 BICD1Q96G01 975 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 C7orf25Q9BPX7 421 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 ST6GALNAC4Q9H4F1 302 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 MRPL44Q9H9J2 332 aaKnown RBP12.37□□□□□ -0.43
SF3B6-201ENST00000233468 RC3H2Q9HBD1 1191 aaKnown RBP12.37□□□□□ -0.43
SF3B6-201ENST00000233468 OLFML3Q9NRN5 406 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 PANK4Q9NVE7 773 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
SF3B6-201ENST00000233468 EXOC7Q9UPT5 735 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 HPSEQ9Y251 543 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 GIT1Q9Y2X7 761 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 PCDHB12Q9Y5F1 795 aa12.37□□□□□ -0.43
SF3B6-201ENST00000233468 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 PVALEFA0A1B0GWK0 134 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 H3BQ06 376 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms