RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 IL1RAPL1Q9NZN1 696 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 FAM169AQ9Y6X4 670 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 C4AP0C0L4 1744 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 C4BP0C0L5 1744 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 TNKSO95271 1327 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 ZSCAN5CA6NGD5 496 aaPredicted RBP8.93□□□□□ -0.98
SPARC-201ENST00000231061 USO1O60763 962 aaKnown RBP8.93□□□□□ -0.98
SPARC-201ENST00000231061 APBB3O95704 486 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 TRIM14Q14142 442 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
SPARC-201ENST00000231061 ESR2Q92731 530 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 GPATCH1Q9BRR8 931 aaKnown RBP8.93□□□□□ -0.98
SPARC-201ENST00000231061 PCDHGB7Q9Y5F8 929 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 SOS2Q07890 1332 aaPredicted RBP8.93□□□□□ -0.98
SPARC-201ENST00000231061 CYP2D7A0A087X1C5 515 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 MAGEB6P1A0A0J9YX57 407 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 LOC105371267A0A1B0GV96 52 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 ARHGAP10A1A4S6 786 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 SERPINB3P29508 390 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 LIMK1P53667 647 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 ACY1Q03154 408 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 SGCGQ13326 291 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 E2F2Q14209 437 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 SPICE1Q8N0Z3 855 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 ZNF540Q8NDQ6 660 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 IL17RDQ8NFM7 739 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 FAM129AQ9BZQ8 928 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 VPS37BQ9H9H4 285 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 KLC4Q9NSK0 619 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 GIMAP2Q9UG22 337 aa8.93□□□□□ -0.98
SPARC-201ENST00000231061 CORO1CQ9ULV4 474 aaPredicted RBP8.93□□□□□ -0.98
SPARC-201ENST00000231061 VWA3AA6NCI4 1184 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 STRNO43815 780 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 TCEA3O75764 348 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 PPP1R37O75864 691 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 OR5F1O95221 314 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 LINGO3P0C6S8 592 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 IL6STP40189 918 aaPredicted RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 FUT2Q10981 343 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 KRT71Q3SY84 523 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 SPATA1Q5VX52 437 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 TRIM65Q6PJ69 517 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 SRGAP1Q7Z6B7 1085 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 KSR1Q8IVT5 923 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 SMYD4Q8IYR2 804 aaPredicted RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 STAMQ92783 540 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 NCLNQ969V3 563 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 EPC1Q9H2F5 836 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 EMC3Q9P0I2 261 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 CHMP2BQ9UQN3 213 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 SRPRBQ9Y5M8 271 aaKnown RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 ERVV-1B6SEH8 477 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 SMIM22K7EJ46 135 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 COBLO75128 1261 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 SIN3BO75182 1162 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 TFPTP0C1Z6 253 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 KRT2P35908 639 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 BEX3Q00994 111 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 CACNB2Q08289 660 aaPredicted RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 RFTN1Q14699 578 aaPredicted RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 ZNF174Q15697 407 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 CCDC153Q494R4 210 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 IFIT1BQ5T764 474 aaKnown RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 MAMDC2Q7Z304 686 aaPredicted RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 CAND1Q86VP6 1230 aaKnown RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 GPIHBP1Q8IV16 184 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 ZNF34Q8IZ26 560 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 CFAP61Q8NHU2 1237 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 CCDC12Q8WUD4 166 aaPredicted RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 ACSBG1Q96GR2 724 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 CALN1Q9BXU9 219 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 CNGB3Q9NQW8 809 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
SPARC-201ENST00000231061 V9GY48 417 aaPredicted RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 MYH7P12883 1935 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 ZBED4O75132 1171 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 LCA5LO95447 670 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 S100A6P06703 90 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 PDHBP11177 359 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 H2AFXP16104 143 aaPredicted RBP8.92□□□□□ -0.98
SPARC-201ENST00000231061 TXLNAP40222 546 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 ERFP50548 548 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 USP46P62068 366 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 CHRNDQ07001 517 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 LAMC2Q13753 1193 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 MORC3Q14149 939 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 PMEPA1Q969W9 287 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 TTC17Q96AE7 1141 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 WDR24Q96S15 920 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 TSG101Q99816 390 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 LZTFL1Q9NQ48 299 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.92□□□□□ -0.98
SPARC-201ENST00000231061 RTL9Q8NET4 1388 aa8.92□□□□□ -0.98
SPARC-201ENST00000231061 GRK2P25098 689 aa8.91□□□□□ -0.98
SPARC-201ENST00000231061 TKTP29401 623 aaKnown RBP8.91□□□□□ -0.98
SPARC-201ENST00000231061 GALNSP34059 522 aa8.91□□□□□ -0.98
SPARC-201ENST00000231061 GYG1P46976 350 aa8.91□□□□□ -0.98
SPARC-201ENST00000231061 SARSP49591 514 aaKnown RBP8.91□□□□□ -0.98
SPARC-201ENST00000231061 GPC3P51654 580 aa8.91□□□□□ -0.98
SPARC-201ENST00000231061 PPP2R3AQ06190 1150 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms