RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 OTOP1Q7RTM1 612 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 PARP9Q8IXQ6 854 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 ABRAQ8N0Z2 381 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 CCDC114Q96M63 670 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 NAP1L3Q99457 506 aaPredicted RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 FAM129AQ9BZQ8 928 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 PPANQ9NQ55 473 aaKnown RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 CYP39A1Q9NYL5 469 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 LOC102724159A0A0B4J2E5 919 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 FAM187AA6NFU0 413 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 SLC15A5A6NIM6 579 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 ASAP2O43150 1006 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 MGRN1O60291 552 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 FERP16591 822 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 PON1P27169 355 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 SLC8A1P32418 973 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 HPDP32754 393 aaPredicted RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 RPS6P62753 249 aaKnown RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 BAATQ14032 418 aaPredicted RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 PWP2Q15269 919 aaKnown RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 RNF207Q6ZRF8 634 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 PEX26Q7Z412 305 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 CARD9Q9H257 536 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 KCNMB3Q9NPA1 279 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 CNOT8Q9UFF9 292 aaKnown RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 ARMCX3Q9UH62 379 aaPredicted RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 PCDHA12Q9UN75 941 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 UTP11Q9Y3A2 253 aaKnown RBP22.17■■□□□ 1.14
SNX3-201ENST00000230085 DNM1LO00429 736 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 SCTRP47872 440 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 FLT3LGP49771 235 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 SLC12A3P55017 1021 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 HADHBP55084 474 aaKnown RBP22.16■■□□□ 1.14
SNX3-201ENST00000230085 ARHGEF6Q15052 776 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 TCEAL1Q15170 157 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 EXOC3L4Q17RC7 722 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 SLC30A10Q6XR72 485 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 SLC30A5Q8TAD4 765 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 SPAG5Q96R06 1193 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 JPH2Q9BR39 696 aaPredicted RBP22.16■■□□□ 1.14
SNX3-201ENST00000230085 SRRDQ9UH36 339 aa22.16■■□□□ 1.14
SNX3-201ENST00000230085 GNRH1P01148 92 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 HOXD10P28358 340 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 HOXA13P31271 388 aaPredicted RBP22.15■■□□□ 1.14
SNX3-201ENST00000230085 CNTN2Q02246 1040 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 RIPK1Q13546 671 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 QPCTQ16769 361 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 DPP9Q86TI2 863 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 MCF2L2Q86YR7 1114 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 ATP8B4Q8TF62 1192 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 USP6NLQ92738 828 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 CUL5Q93034 780 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 CHMP6Q96FZ7 201 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 ZNF317Q96PQ6 595 aaPredicted RBP22.15■■□□□ 1.14
SNX3-201ENST00000230085 FGFBP2Q9BYJ0 223 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 PSTPIP2Q9H939 334 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 SIX2Q9NPC8 291 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 BRCA2P51587 3418 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 PFASO15067 1338 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 DNAJC25-GNG10A0A024R161 153 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 CYP2B6P20813 491 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 NR2F2P24468 414 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 MAP2K5Q13163 448 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 DHX34Q14147 1143 aaKnown RBP22.15■■□□□ 1.14
SNX3-201ENST00000230085 DUPD1Q68J44 220 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 OLIG1Q8TAK6 271 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 SOCS4Q8WXH5 440 aa22.15■■□□□ 1.14
SNX3-201ENST00000230085 XPO6Q96QU8 1125 aaKnown RBP22.15■■□□□ 1.14
SNX3-201ENST00000230085 DDX47Q9H0S4 455 aaKnown RBP22.15■■□□□ 1.14
SNX3-201ENST00000230085 DAPK3O43293 454 aa22.14■■□□□ 1.13
SNX3-201ENST00000230085 MMP13P45452 471 aa22.14■■□□□ 1.13
SNX3-201ENST00000230085 KNOP1Q1ED39 458 aaKnown RBP22.14■■□□□ 1.13
SNX3-201ENST00000230085 HERC4Q5GLZ8 1057 aaPredicted RBP22.14■■□□□ 1.13
SNX3-201ENST00000230085 USP17L6PQ6QN14 398 aa22.14■■□□□ 1.13
SNX3-201ENST00000230085 GPBP1Q86WP2 473 aa22.14■■□□□ 1.13
SNX3-201ENST00000230085 SYT11Q9BT88 431 aa22.14■■□□□ 1.13
SNX3-201ENST00000230085 ZDHHC18Q9NUE0 388 aa22.14■■□□□ 1.13
SNX3-201ENST00000230085 NOVA2Q9UNW9 492 aaKnown RBP22.14■■□□□ 1.13
SNX3-201ENST00000230085 MEIS2O14770 477 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 TBX3O15119 743 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 CALUO43852 315 aaPredicted RBP22.13■■□□□ 1.13
SNX3-201ENST00000230085 TMEM253P0C7T8 217 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 CHRM1P11229 460 aaPredicted RBP22.13■■□□□ 1.13
SNX3-201ENST00000230085 HSD17B4P51659 736 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 MAGOHP61326 146 aaKnown RBP22.13■■□□□ 1.13
SNX3-201ENST00000230085 CRELD2Q6UXH1 353 aaPredicted RBP22.13■■□□□ 1.13
SNX3-201ENST00000230085 PIGWQ7Z7B1 504 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 SLFN12Q8IYM2 578 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 NPLOC4Q8TAT6 608 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 UBLCP1Q8WVY7 318 aaPredicted RBP22.13■■□□□ 1.13
SNX3-201ENST00000230085 MAGOHBQ96A72 148 aaKnown RBP22.13■■□□□ 1.13
SNX3-201ENST00000230085 FMO2Q99518 471 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 COL20A1Q9P218 1284 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 AMFRQ9UKV5 643 aa22.13■■□□□ 1.13
SNX3-201ENST00000230085 POLR2MP0CAP2 368 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 XRCC5P13010 732 aaKnown RBP22.12■■□□□ 1.13
SNX3-201ENST00000230085 DHX9Q08211 1270 aaKnown RBP22.12■■□□□ 1.13
SNX3-201ENST00000230085 KRT71Q3SY84 523 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 ARSHQ5FYA8 562 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 TNFAIP8L3Q5GJ75 292 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms