RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 SNAPC2Q13487 334 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 ARHGAP44Q17R89 818 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 RHOT2Q8IXI1 618 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 USP38Q8NB14 1042 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 PROCA1Q8NCQ7 364 aaPredicted RBP18.21■□□□□ 0.51
GAPDH-201ENST00000229239 PLEKHO2Q8TD55 490 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 BSNDQ8WZ55 320 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 SUGCTQ9HAC7 445 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 XPNPEP1Q9NQW7 623 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 TMEM59LQ9UK28 342 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 PPME1Q9Y570 386 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 ARID2Q68CP9 1835 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 LRRIQ3A6PVS8 624 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 GPR25O00155 361 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 CBWD2Q8IUF1 395 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ANKRD35Q8N283 1001 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 GPD1LQ8N335 351 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ZNF296Q8WUU4 475 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 EXOC4Q96A65 974 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 MS4A14Q96JA4 679 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 CCDC188H7C350 402 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 KCNK3O14649 394 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ZC3H11AO75152 810 aaKnown RBP eCLIP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 MATR3P43243 847 aaKnown RBP eCLIP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 TNNT3P45378 269 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ALDH5A1P51649 535 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 PPP2R5EQ16537 467 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ZNF771Q7L3S4 317 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ENOSF1Q7L5Y1 443 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ARHGEF19Q8IW93 802 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 FAM71AQ8IYT1 594 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 RASGEF1CQ8N431 466 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 POMGNT1Q8WZA1 660 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ISCUQ9H1K1 167 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 ZNF302Q9NR11 478 aa18.2■□□□□ 0.5
GAPDH-201ENST00000229239 DMGDHQ9UI17 866 aaKnown RBP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 TTC7AQ9ULT0 858 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-201ENST00000229239 IGKV6D-21A0A0A0MT36 114 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 H3BQF6 201 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 POLR3GO15318 223 aaPredicted RBP18.19■□□□□ 0.5
GAPDH-201ENST00000229239 OATP04181 439 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 GZMAP12544 262 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 EDNRBP24530 442 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 COPB2P35606 906 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 CYP24A1Q07973 514 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.19■□□□□ 0.5
GAPDH-201ENST00000229239 DAAM2Q86T65 1068 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 NT5DC3Q86UY8 548 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 CAVIN3Q969G5 261 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 HES6Q96HZ4 224 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 ABHD8Q96I13 439 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
GAPDH-201ENST00000229239 NIFKQ9BYG3 293 aaKnown RBP18.19■□□□□ 0.5
GAPDH-201ENST00000229239 POLR3FQ9H1D9 316 aaPredicted RBP18.19■□□□□ 0.5
GAPDH-201ENST00000229239 GDF3Q9NR23 364 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 EHD2Q9NZN4 543 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 HPCAL4Q9UM19 191 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 KIAA1217Q5T5P2 1943 aa18.19■□□□□ 0.5
GAPDH-201ENST00000229239 SYNGAP1Q96PV0 1343 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 PGRMC1O00264 195 aaKnown RBP18.18■□□□□ 0.5
GAPDH-201ENST00000229239 HNRNPDLO14979 420 aaKnown RBP18.18■□□□□ 0.5
GAPDH-201ENST00000229239 LRRN2O75325 713 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 TGFB3P10600 412 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 EMC2Q15006 297 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 SLC39A4Q6P5W5 647 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 GOLGA6L1Q8N7Z2 621 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 FBXL13Q8NEE6 735 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 SLC35G2Q8TBE7 412 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 MORC4Q8TE76 937 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 SCFD2Q8WU76 684 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 SHC3Q92529 594 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 NAP1L3Q99457 506 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-201ENST00000229239 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.18■□□□□ 0.52e-16■■■■■ 37.7
GAPDH-201ENST00000229239 KIFC3Q9BVG8 833 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 SMARCAL1Q9NZC9 954 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-201ENST00000229239 KCNH4Q9UQ05 1017 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 STYXL1Q9Y6J8 313 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 GOLGA8IPA6NC78 632 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 GOLGA8JA6NMD2 632 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 CXCL11O14625 94 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 PIGRP01833 764 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 RFC5P40937 340 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 NAMPTP43490 491 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 POLGP54098 1239 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-201ENST00000229239 CRHR2Q13324 411 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 NEDD9Q14511 834 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 SMYD5Q6GMV2 418 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 TRMT1LQ7Z2T5 733 aaKnown RBP18.18■□□□□ 0.5
GAPDH-201ENST00000229239 HDAC7Q8WUI4 952 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 NT5C1BQ96P26 610 aa18.18■□□□□ 0.5
GAPDH-201ENST00000229239 DHX33Q9H6R0 707 aaKnown RBP18.18■□□□□ 0.5
GAPDH-201ENST00000229239 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 A0A0G2JLL6 359 aaPredicted RBP18.17■□□□□ 0.5
GAPDH-201ENST00000229239 EXTL3O43909 919 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 RTN2O75298 545 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 ZMYND10O75800 440 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 STRN3Q13033 797 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms