RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SYT11Q9BT88 431 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 ISCUQ9H1K1 167 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 CD248Q9HCU0 757 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 SUCLA2Q9P2R7 463 aaPredicted RBP14.15□□□□□ -0.14
CTNS-201ENST00000046640 TMEM59LQ9UK28 342 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 ATP8A1Q9Y2Q0 1164 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 PCDHA10Q9Y5I2 948 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 TLDC2A0PJX2 215 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 ZBTB48P10074 688 aaPredicted RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 PTPRAP18433 802 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 SSTR3P32745 418 aaPredicted RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 C2CD6Q53TS8 623 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 NOP9Q86U38 636 aaKnown RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 SYCE1Q8N0S2 351 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 ACTRT1Q8TDG2 376 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 TAS1R2Q8TE23 839 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 KRT35Q92764 455 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 HES6Q96HZ4 224 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 KREMEN1Q96MU8 473 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 MOV10L1Q9BXT6 1211 aaKnown RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 CNOT8Q9UFF9 292 aaKnown RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 ADGRA3Q8IWK6 1321 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 HNRNPDLO14979 420 aaKnown RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 MMEP08473 750 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 CCDC172P0C7W6 258 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 SMTNP53814 917 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 MAGOHP61326 146 aaKnown RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 DHX9Q08211 1270 aaKnown RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 ZNF844Q08AG5 666 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 TMEM132BQ14DG7 1078 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 KRT71Q3SY84 523 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 MTERF2Q49AM1 385 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 NIPA1Q7RTP0 329 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 VSIG10LQ86VR7 867 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 ZNF280CQ8ND82 737 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 GLG1Q92896 1179 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 TATDN2Q93075 761 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 MAGOHBQ96A72 148 aaKnown RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 JPH2Q9BR39 696 aaPredicted RBP14.14□□□□□ -0.15
CTNS-201ENST00000046640 ERVK-5Q9HDB9 667 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 ALG6Q9Y672 507 aa14.14□□□□□ -0.15
CTNS-201ENST00000046640 PFASO15067 1338 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 HMGB1P1B2RPK0 211 aaPredicted RBP14.13□□□□□ -0.15
CTNS-201ENST00000046640 HSPA9P38646 679 aaKnown RBP14.13□□□□□ -0.15
CTNS-201ENST00000046640 IFFO1Q0D2I5 559 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 CCDC60Q8IWA6 550 aaPredicted RBP14.13□□□□□ -0.15
CTNS-201ENST00000046640 FAM213AQ9BRX8 229 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 ANKRD62A6NC57 917 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 JAK3P52333 1124 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 ZNF280AP59817 542 aaPredicted RBP14.13□□□□□ -0.15
CTNS-201ENST00000046640 KRT76Q01546 638 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 KIF22Q14807 665 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 SPRED3Q2MJR0 410 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 SLC39A4Q6P5W5 647 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 TMEM143Q96AN5 459 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 CYFIP2Q96F07 1278 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 NCAPGQ9BPX3 1015 aa14.13□□□□□ -0.15
CTNS-201ENST00000046640 A0A0A6YYK5 440 aaPredicted RBP14.12□□□□□ -0.15
CTNS-201ENST00000046640 GOLGA6L7A0A1B0GV03 622 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 DDX3YO15523 660 aaKnown RBP14.12□□□□□ -0.15
CTNS-201ENST00000046640 KRT5P13647 590 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 CCND2P30279 289 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 PPATQ06203 517 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 SCYL3Q8IZE3 742 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 ZNF526Q8TF50 670 aaPredicted RBP14.12□□□□□ -0.15
CTNS-201ENST00000046640 NCKAP1LP55160 1127 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 SP2Q02086 613 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 MICALCLQ6ZW33 695 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 MREGQ8N565 214 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 TRPM4Q8TD43 1214 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 INTUQ9ULD6 942 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 PSME4Q14997 1843 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 CHRNB2P17787 502 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 FNTAP49354 379 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 CNTN2Q02246 1040 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 ACTN3Q08043 901 aaPredicted RBP14.12□□□□□ -0.15
CTNS-201ENST00000046640 SEZ6Q53EL9 994 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 SEPT14Q6ZU15 432 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 EEPD1Q7L9B9 569 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 EPS8L1Q8TE68 723 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 PARD3BQ8TEW8 1205 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 CCDC114Q96M63 670 aa14.12□□□□□ -0.15
CTNS-201ENST00000046640 MYCBPQ99417 103 aaPredicted RBP14.12□□□□□ -0.15
CTNS-201ENST00000046640 A1CFQ9NQ94 594 aaKnown RBP14.12□□□□□ -0.15
CTNS-201ENST00000046640 ZNF214Q9UL59 606 aaPredicted RBP14.12□□□□□ -0.15
CTNS-201ENST00000046640 ZNF541Q9H0D2 1346 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 LYPLA2O95372 231 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 FAM107AO95990 144 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 SFNP31947 248 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 ACOT2P49753 483 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 PRKCEQ02156 737 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 CCDC121Q6ZUS5 278 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 TEX2Q8IWB9 1127 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 NSUN6Q8TEA1 469 aaKnown RBP14.11□□□□□ -0.15
CTNS-201ENST00000046640 LRRC45Q96CN5 670 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 CABS1Q96KC9 395 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 JPH1Q9HDC5 661 aaPredicted RBP14.11□□□□□ -0.15
CTNS-201ENST00000046640 DDX20Q9UHI6 824 aaKnown RBP14.11□□□□□ -0.15
CTNS-201ENST00000046640 GMNCA6NCL1 334 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms