RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Prl2b1Q9DAZ2 228 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 PatjQ63ZW7 1834 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Prkg1P0C605 671 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Fgl2P12804 432 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Rab21P35282 222 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ptprn2P80560 1001 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Frmd8Q3UFK8 466 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Gprin1Q3UNH4 932 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 BoraQ8BS90 525 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Tdrd7Q8K1H1 1086 aaKnown RBP11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Rassf9Q8K342 435 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cys1Q8R4T1 145 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Pls3Q99K51 630 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Grtp1Q9D3N8 359 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cfap53Q9D439 514 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Drap1Q9D6N5 205 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cdc42ep4Q9JM96 349 aaKnown RBP11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 CenphQ9QYM8 241 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Usp21Q9QZL6 566 aa11.27□□□□□ -0.6
Ptpre-208ENSMUST00000211788 NinQ61043 2035 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Xirp1O70373 1129 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 GcP21614 476 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Adcy7P51829 1099 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 PltpP55065 493 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 LxnP70202 222 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Drp2Q05AA6 957 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 BC051142Q3V0M8 400 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Serpinb1cQ5SV42 375 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gja3Q64448 417 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Sv2cQ69ZS6 727 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Klhdc10Q6PAR0 439 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 NostrinQ6WKZ7 506 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 R3hdm2Q80TM6 1044 aaKnown RBP11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pnma1Q8C1C8 353 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pak2Q8CIN4 524 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Il17cQ8K4C5 194 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rhobtb2Q91V93 728 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pcdha5Q91Y15 934 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Stx17Q9D0I4 301 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Map3k20Q9ESL4 802 aaKnown RBP11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 EmcnQ9R0H2 261 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Cry2Q9R194 592 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 NrapQ80XB4 1728 aa11.27□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ttll6A4Q9E8 822 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Zfp105G3X9I0 524 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Mdm4O35618 489 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Chmp6P0C0A3 200 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 L1camP11627 1260 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pik3r1P26450 724 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Psmc5P62196 406 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Hdgfl1Q2VPR5 283 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Krt35Q497I4 455 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gm5935Q497S0 212 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Asap3Q5U464 904 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Cnot7Q60809 285 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 FdxrQ61578 494 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ppp2r5aQ6PD03 486 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Q6PD19 689 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Snip1Q8BIZ6 383 aaKnown RBP11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Sfr1Q8BP27 319 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rapgef5Q8C0Q9 814 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rtp1Q8C8C1 263 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Nxf1Q99JX7 618 aaKnown RBP11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ccdc70Q9D9B0 223 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Slc40a1Q9JHI9 570 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Plscr1Q9JJ00 328 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Prl6a1O35257 230 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 PtpraP18052 829 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 RxrbP28704 520 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Kif5aP33175 1027 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 FerP70451 823 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Neurl1bQ0MW30 546 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rgs9bpQ148R9 237 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Znf697Q569E7 569 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Xpnpep1Q6P1B1 623 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Trim37Q6PCX9 961 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Slc7a6osQ7TPE5 306 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Dusp4Q8BFV3 398 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rint1Q8BZ36 792 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Fam193aQ8CGI1 1231 aaKnown RBP11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 OscarQ8VBT3 265 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 GcshQ91WK5 170 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Hspbp1Q99P31 357 aaKnown RBP11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rassf3Q99P51 232 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Nxnl2Q9D531 156 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Lrrc34Q9DAM1 415 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 SerhlQ9EPB5 311 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Dmap1Q9JI44 468 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Sh2b2Q9JID9 621 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Tlr5Q9JLF7 859 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ankrd2Q9WV06 328 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 B3galt4Q9Z0F0 371 aa11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Tjp2Q9Z0U1 1167 aaKnown RBP11.26□□□□□ -0.61
Ptpre-208ENSMUST00000211788 D830030K20RikE9PYQ5 218 aa11.25□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Mroh9G5E8L9 891 aa11.25□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gm3043K7N693 218 aa11.25□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gm16440K7N6G6 218 aa11.25□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gm2244L7N2A3 218 aa11.25□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gm3278L7N2D2 218 aa11.25□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gm8271L7N2E2 218 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms