RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Ifi205aQ8CGE8 404 aa17.46■□□□□ 0.39
Ubr3-202ENSMUST00000112251 Stk33Q924X7 491 aa17.46■□□□□ 0.39
Ubr3-202ENSMUST00000112251 Slc7a14Q8BXR1 771 aa17.46■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Mzt2Q9CQ25 159 aa17.46■□□□□ 0.38
Ubr3-202ENSMUST00000112251 PdhbQ9D051 359 aa17.46■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Krt16Q9Z2K1 469 aa17.46■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tiam1Q60610 1591 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gm8237E9Q257 205 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Kcna5Q61762 602 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ints4Q8CIM8 964 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Brd8Q8R3B7 951 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Dbndd2Q9CRD4 158 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Timm50Q9D880 353 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 WapP01173 134 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 BtkP35991 659 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Cdo1P60334 200 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Atn1O35126 1175 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Fam20cQ5MJS3 579 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 TpbpbQ9CQC0 121 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Q9D937 123 aaKnown RBP17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Bub1O08901 1058 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Klra8Q60682 266 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Acap3Q6NXL5 833 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Dync1li2Q6PDL0 492 aaKnown RBP17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ncoa5Q91W39 579 aaKnown RBP17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Cnbd2Q9D5U8 673 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 DcpsQ9DAR7 338 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ythdc2B2RR83 1445 aaKnown RBP17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Vmn2r78K7N6U5 853 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Pkn1P70268 946 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tssk1bQ61241 365 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Klhl11Q8CE33 709 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Rell1Q8K2J7 272 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tjap1Q9DCD5 539 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tada2bD3Z4Z0 420 aaKnown RBP17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 IkbkbO88351 757 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Rfc4Q99J62 364 aa17.45■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Nfx1B1AY10 1114 aaKnown RBP17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 DnttP09838 530 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Serpina1cQ00896 412 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Serpina1dQ00897 413 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Arhgap45Q3TBD2 1116 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 GmncQ3URY2 333 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gucy2cQ3UWA6 1072 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Hspa1aQ61696 641 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Cdc16Q8R349 620 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Eif4g1Q6NZJ6 1600 aaKnown RBP17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Unc13dB2RUP2 1085 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Il15P48346 162 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Arf4P61750 180 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Vsnl1P62761 191 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 RadilQ69Z89 1099 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 PiguQ8K358 434 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Agap3Q8VHH5 910 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Stk36Q69ZM6 1316 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Atg14Q8CDJ3 492 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Brd9Q3UQU0 596 aaKnown RBP17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Olfr118Q7TRJ6 321 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 NcaphQ8C156 731 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ccdc63Q8CDV6 558 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 CherpQ8CGZ0 936 aaKnown RBP17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 HibchQ8QZS1 385 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ttc33Q9D6K7 262 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Cbx6Q9DBY5 414 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Arhgef7Q9ES28 862 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gm3173A6NAS3 172 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gm3020E9Q3J7 150 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gm2897K7N6T7 172 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tshz1Q5DTH5 1084 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Pnma2Q8BHK0 365 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Thoc5Q8BKT7 683 aaKnown RBP17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Phf20Q8BLG0 1010 aaKnown RBP17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gm3411Q8C7R2 150 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Zcchc7B1AX39 541 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Rasip1Q3U0S6 961 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Lcp1Q61233 627 aaKnown RBP17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Vil1Q62468 827 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Scn3bQ8BHK2 215 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Cnot8Q9D8X5 292 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Rapgef6Q5NCJ1 1609 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Myh7Q91Z83 1935 aa17.44■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Retreg1dQ8VE91 480 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 TarsQ9D0R2 722 aaKnown RBP17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tcp10bE9PYJ0 438 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Mtnd3P03899 115 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 OsbpQ3B7Z2 805 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tas2r131Q7M708 310 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Nsd3Q6P2L6 1439 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tcea3P23881 347 aaKnown RBP17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Foxp1P58462 705 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Cep44Q5HZK1 386 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Slc27a1Q60714 646 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Olfr1494Q8VGP8 315 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Arhgef25Q9CWR0 618 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Wdr49A0A0N4SUK7 710 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Plekha7Q3UIL6 1118 aaKnown RBP17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gm10392Q3V3I3 114 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ptk6Q64434 451 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tdpoz3Q717B4 365 aa17.43■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Trim50Q810I2 483 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms