RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Daam2Q80U19 1115 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Fgd5Q80UZ0 1219 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Rbm34Q8C5L7 375 aaKnown RBP33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Rftn2Q8CHX7 500 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Rpp40Q8R1F9 363 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Olfr458Q8VF80 313 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Olfr457Q8VGP5 313 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Tlr5Q9JLF7 859 aa33.13■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Klhl34A2AI76 644 aa33.12■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Vmn2r121A2BE32 847 aa33.12■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Gm5934D3Z4U6 212 aa33.12■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Wdr5P61965 334 aa33.12■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Kiaa1841Q68FF0 718 aa33.12■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Armcx2Q6A058 784 aaKnown RBP33.12■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Vps52Q8C754 723 aaKnown RBP33.12■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Tmem63cQ8CBX0 802 aa33.12■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Gp6P0C191 313 aa33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 DsppP97399 934 aa33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Sppl2bQ3TD49 578 aa33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Nom1Q3UFM5 854 aaKnown RBP33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 SucoQ8C341 1250 aa33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Bbs7Q8K2G4 715 aa33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 B4galt3Q91YY2 395 aa33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Q9D2Q3 444 aa33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Fbxo17Q9QZM8 286 aa33.11■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Gm6583E9Q8Z1 469 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 R3hdm1E9Q9Q2 1135 aaKnown RBP33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Smpd1Q04519 627 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Armcx3Q8BHS6 379 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Taf6lQ8R2K4 616 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 MiosQ8VE19 875 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Txndc5Q91W90 417 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Sdr42e1Q9D665 394 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Ttc9bQ9D6E4 239 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Taf1Q80UV9 1891 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Zc3h18Q0P678 948 aaKnown RBP33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Rpf1Q7TND5 349 aaKnown RBP33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Ankk1Q8BZ25 745 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Cwh43Q91YL7 699 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Cbx6Q9DBY5 414 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Usp29Q9ES63 869 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Rad9aQ9Z0F6 389 aa33.1■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Gimap9G3X987 291 aa33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Rplp2P99027 115 aaKnown RBP33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Klhl17Q6TDP3 640 aa33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Jade1Q6ZPI0 834 aaKnown RBP33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 RimklbQ80WS1 387 aa33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Sox30Q8CGW4 782 aa33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Olfr393Q8VGR6 312 aa33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Thap2Q9D305 217 aa33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Acox2Q9QXD1 681 aa33.09■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Wdr78E9PYY5 807 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Tnfrsf11aO35305 625 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Pbx2O35984 430 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Pla2g4bP0C871 782 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Pla2g4aP47713 748 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 VegfaQ00731 214 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Cd163Q2VLH6 1121 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Npas4Q8BGD7 802 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 FtoQ8BGW1 502 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 YarsQ91WQ3 528 aaKnown RBP33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Kcnq4Q9JK97 696 aa33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Gys1Q9Z1E4 738 aaKnown RBP33.08■■■□□ 2.89
Ctdnep1-201ENSMUST00000108593 Gm10801F7C7Q0 168 aa33.07■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Ndufs6P52503 116 aa33.07■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Hace1Q3U0D9 909 aa33.07■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 GartQ64737 1010 aa33.07■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Tbc1d30Q69ZT9 766 aa33.07■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Dhx40Q6PE54 779 aaKnown RBP33.07■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Ush1gQ80T11 461 aa33.07■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 March8Q9DBD2 286 aa33.07■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Plekha5E9Q6H8 1269 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 EnahQ03173 802 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Lrfn2Q80TG9 788 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Colgalt1Q8K297 617 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Pex10B1AUE5 324 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Tnfaip1O70479 316 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 IkbkbO88351 757 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Prl2c2P04095 224 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Oaz1P54369 227 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Hmgb1P63158 215 aaKnown RBP33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Mfsd14aP70187 490 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Atp13a4Q5XF90 1193 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Bcar1Q61140 874 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Lman1Q9D0F3 517 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Cfap53Q9D439 514 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Cfap45Q9D9U9 551 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Ppp2r3dQ9Z176 491 aa33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Knop1Q9Z2Q2 478 aaKnown RBP33.06■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Rp1l1Q8CGM2 1859 aa33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 IapP03975 557 aa33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 GcP21614 476 aa33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Olfr23Q7TRX4 325 aa33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Reps2Q80XA6 521 aa33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Ddx10Q80Y44 875 aaKnown RBP33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Ttc26Q8BS45 554 aa33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Traf3ip3Q8C0G2 513 aa33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Pcdha2Q91Y17 948 aa33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 PollQ9QXE2 573 aaKnown RBP33.05■■■□□ 2.88
Ctdnep1-201ENSMUST00000108593 Zfp358E9Q8M1 571 aa33.04■■■□□ 2.88
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms