RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Tcp1P11983 556 aaKnown RBP8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Wnt7bP28047 349 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Map2k1P31938 393 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Fmr1P35922 614 aaKnown RBP8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Q3TTJ4 293 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ppp1r7Q3UM45 361 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Gm5935Q497S0 212 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Wdr18Q4VBE8 431 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Acbd5Q5XG73 508 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 FdxrQ61578 494 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ddx3xQ62167 662 aaKnown RBP8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Pla2g4cQ64GA5 597 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Atp6v0d2Q80SY3 350 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 NrcamQ810U4 1256 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Trim65Q8BFW4 522 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Trim6Q8BGE7 488 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Tdp1Q8BJ37 609 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 N4bp3Q8C7U1 537 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Fbxo43Q8CDI2 640 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Il17cQ8K4C5 194 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Atp2a1Q8R429 994 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Xpo5Q924C1 1204 aaKnown RBP8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Slc12a9Q99MR3 914 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 1700129C05RikQ9CQ77 218 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Znf687Q9D2D7 1237 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 PrameQ9D4Z5 464 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 1700016D06RikQ9DAA5 166 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Limd1Q9QXD8 668 aa8.14□□□□□ -1.11
Trim40-201ENSMUST00000087158 Gm7086A0A1W2P766 342 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 H2afzP0C0S6 128 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Gna15P30678 374 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Wee1P47810 646 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Morf4l1P60762 362 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Myo1fP70248 1099 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 WasP70315 520 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Rnf113a2Q14B01 337 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 H2afvQ3THW5 128 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Lrrc14bQ3UJB3 510 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Asap3Q5U464 904 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ppp1r1bQ60829 194 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Sh3gl2Q62420 352 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Slain1Q68FF7 579 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ncapg2Q6DFV1 1138 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Nudt16Q6P3D0 195 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 NfrkbQ6PIJ4 1296 aaKnown RBP8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ppm1eQ80TL0 749 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Elac2Q80Y81 831 aaKnown RBP8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Prpf31Q8CCF0 499 aaKnown RBP8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ago2Q8CJG0 860 aaKnown RBP8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Mmgt1Q8K273 131 aaKnown RBP8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Olfr395Q8VGR3 312 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Hdhd5Q91WM2 419 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ivns1abpQ920Q8 642 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ubxn6Q99PL6 442 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Sppl3Q9CUS9 384 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Eif4e3Q9DBB5 207 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Prg3Q9JL95 222 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 H2-OaQ9QWV1 250 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Gyg1Q9R062 333 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Angptl3Q9R182 455 aa8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Myo5aQ99104 1853 aaKnown RBP8.13□□□□□ -1.11
Trim40-201ENSMUST00000087158 Gm28919A0A087WP35 240 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Btbd18A0A0A6YY25 723 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Skor2A7M7C7 1008 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Sclt1G5E861 688 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 GclmO09172 274 aaKnown RBP8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Enc1O35709 589 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Prom1O54990 867 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Trdmt1O55055 415 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Pja1O55176 578 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Pik3caP42337 1068 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Gfpt1P47856 697 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Polr2fP61219 127 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 CiitaP79621 1155 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Cct5P80316 541 aaKnown RBP8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Trim43aQ3TL54 445 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Miga1Q4QQM5 600 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Stxbp5lQ5DQR4 1185 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Gba2Q69ZF3 918 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Acot5Q6Q2Z6 421 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Tlr11Q6R5P0 926 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Mtmr10Q7TPM9 771 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 RubcnQ80U62 956 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Depdc1bQ8BH88 529 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Tcaf1Q8BNE1 924 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Kctd6Q8BNL5 237 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 AsphQ8BSY0 741 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Kif2bQ8C0N1 668 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Mamdc2Q8CG85 686 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Pop1Q8K205 1045 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Nmrk1Q91W63 195 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Dnajc17Q91WT4 303 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Tmem206Q9D771 350 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Smco2Q9DA21 347 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Nup50Q9JIH2 466 aaKnown RBP8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Sv2aQ9JIS5 742 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Cdc42ep4Q9JM96 349 aaKnown RBP8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Nfu1Q9QZ23 255 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Taf1Q80UV9 1891 aa8.12□□□□□ -1.11
Trim40-201ENSMUST00000087158 Ttc13A0A1L1SSC7 844 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms