RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 PrameQ9D4Z5 464 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Borcs6Q9D6W8 360 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cpne8Q9DC53 577 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Scyl1Q9EQC5 806 aaKnown RBP10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Sipa1l3G3X9J0 1776 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Osbpl7A2A716 963 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Exoc4O35382 975 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Trappc3O55013 180 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 MyocO70624 490 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 RpsaP14206 295 aaKnown RBP10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rnf216P58283 853 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 DeptorQ570Y9 409 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ptger2Q62053 362 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Npdc1Q64322 332 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 NrcamQ810U4 1256 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 DcakdQ8BHC4 231 aaKnown RBP10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 PreplQ8C167 725 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 NelfcdQ922L6 591 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Mzb1Q9D8I1 188 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Usp29Q9ES63 869 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tmod2Q9JKK7 351 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Arhgef10lA2AWP8 1280 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm5795E9PZN8 263 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 PtenO08586 403 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ift81O35594 676 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Trmt1Q3TX08 663 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 D630036H23RikQ3UQD6 204 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Spire2Q8K1S6 718 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Lrrc8cQ8R502 803 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Paip2Q9D6V8 124 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Extl2Q9ES89 330 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Aldh18a1Q9Z110 795 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Serpinb6cW4VSP4 379 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Vmn2r77L7N2B7 854 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Chil3O35744 398 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ppp3caP63328 521 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cdca2Q14B71 982 aaKnown RBP10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 SpoplQ2M2N2 392 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Spata24Q6P926 205 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ano5Q75UR0 904 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Dusp4Q8BFV3 398 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Calhm4Q8CE93 315 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ero1aQ8R180 464 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 YwhabQ9CQV8 246 aaKnown RBP10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tmco5aQ9D9D5 303 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Kcnh7Q9ER47 1195 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Trpc3Q9QZC1 836 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ccdc13D3YV10 709 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm6583E9Q8Z1 469 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pja1O55176 578 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Klc1O88447 541 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Il13ra2O88786 383 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Krt13P08730 437 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rasgrf1P27671 1262 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tnni3P48787 211 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 SftpbP50405 377 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Sesn2P58043 480 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Scarf1Q5ND28 820 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pabpn1lQ5XFR0 273 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Serpinb6Q60854 378 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 SnphQ80U23 495 aa10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Mrpl11Q9CQF0 192 aaKnown RBP10.38□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 EporP14753 507 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Marcksl1P28667 200 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Frmd8Q3UFK8 466 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Nlrp14Q6B966 993 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Dzip3Q7TPV2 1204 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 SrlQ7TQ48 910 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ldlrap1Q8C142 308 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ttc8Q8VD72 515 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Spdl1Q923A2 608 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Med15Q924H2 789 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Trim66Q924W6 1242 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tll2Q9WVM6 1012 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Iqcj-Schip1A0A088MLT8 559 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Mageb2A2AHM0 380 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fam71aB7XG49 585 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Usp17ldG5E8G2 545 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Usp17lcG5E8I7 545 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Schip1P0DPB4 484 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Wfs1P56695 890 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Smad1P70340 465 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Col6a1Q04857 1025 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ubxn2bQ0KL01 331 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fam193bQ3U2K0 892 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Lrig3Q6P1C6 1117 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ppp2r5aQ6PD03 486 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rnaseh2bQ80ZV0 308 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Apol9bQ8C7I4 310 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Apol9aQ8VDU3 310 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Slc12a8Q8VI23 705 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pdxdc1Q99K01 787 aaKnown RBP10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 DgkhD3YXJ0 1156 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm3415J3QMS8 315 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Slc8a1P70414 970 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Sox10Q04888 466 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Agxt2Q3UEG6 513 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Klra6Q60653 266 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Nlrp4fQ66X05 959 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Zcwpw1Q6IR42 630 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms