RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Snx25Q3ZT31 840 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gas8Q60779 478 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pabpc4Q6PHQ9 660 aaKnown RBP9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Bicdl2Q8CHW5 507 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 PdxkQ8K183 312 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 VillQ91YD6 859 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Serpina9Q9D7D2 418 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mzb1Q9D8I1 188 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cse1lQ9ERK4 971 aaKnown RBP9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 H2-OaQ9QWV1 250 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 JmyQ9QXM1 983 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Znf354bQ9QXT9 601 aa9.41□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pds5aQ6A026 1332 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Scgb2b11A0A087WR49 112 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Sec14l1A8Y5H7 715 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mmp15O54732 657 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Chmp6P0C0A3 200 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tap2P36371 702 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 PuraP42669 321 aaKnown RBP9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Arf4P61750 180 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Srebf2Q3U1N2 1130 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mettl25Q6NXH8 597 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 PoliQ6R3M4 717 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Rnf139Q7TMV1 668 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Znf579Q80VM4 562 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Bola2Q8BGS2 86 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Depdc1bQ8BH88 529 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Etf1Q8BWY3 437 aaKnown RBP9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Stxbp5Q8K400 1152 aaKnown RBP9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Polr3eQ9CZT4 710 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Slfn14V9GXG1 899 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Olfr552E9Q545 317 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cbfa2t2O70374 594 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 EmbP21995 330 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 GaaP70699 953 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Edem3Q2HXL6 931 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Hdgfl1Q2VPR5 283 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pacsin1Q61644 441 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pla2g4cQ64GA5 597 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ppme1Q8BVQ5 386 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Amer2Q8CCJ4 672 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cbwd1Q8VEH6 393 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ca9Q8VHB5 437 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Rbm42Q91V81 474 aaKnown RBP9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Atp6v0a4Q920R6 833 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 FignQ9ERZ6 759 aa9.4□□□□□ -0.9
Trim39-201ENSMUST00000042717 Olfr456B2RT27 312 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ccdc152E9PX14 254 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm20503G3UZK1 150 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Alkbh1P0CB42 389 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pla2g4aP47713 748 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Senp1P59110 640 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Hexim2Q3TVI4 313 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sh3gl1Q62419 368 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Olfr392Q7TRX6 312 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Maip1Q8BHE8 291 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Fbxo43Q8CDI2 640 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 OgtQ8CGY8 1046 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Iqsec1Q8R0S2 961 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Olfr458Q8VF80 313 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Olfr1499Q8VG65 314 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Olfr457Q8VGP5 313 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Olfr1494Q8VGP8 315 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pcdha2Q91Y17 948 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Drc3Q9D5E4 523 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pold3Q9EQ28 462 aa9.4□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm13084A2A8N0 494 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sept4P28661 478 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pola2P33611 600 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Polr2fP61219 127 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mief2Q5NCS9 454 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rpf1Q7TND5 349 aaKnown RBP9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Crybg3Q80W49 1005 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Lmo3Q8BZL8 145 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Commd10Q8JZY2 202 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rnf6Q9DBU5 667 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sbf1Q6ZPE2 1867 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gucy2dA0A0U1RPR8 1117 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Slc6a21A0A1B0GSD2 748 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ccdc121E9Q6D3 323 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ube3aO08759 870 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mgat1P27808 447 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cyp2c37P56654 490 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cyp2c54Q6XVG2 490 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tmem260Q8BMD6 703 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Slc9a9Q8BZ00 644 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Slc26a6Q8CIW6 758 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Bclaf1Q8K019 919 aaKnown RBP9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rnf208Q8K0W3 265 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Kct2Q8K201 259 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Eif3cQ8R1B4 911 aaKnown RBP9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Plekhh3Q8VCE9 796 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cyp2c50Q91X77 490 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Psmd6Q99JI4 389 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ssr1Q9CY50 286 aaKnown RBP9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Wfdc1Q9ESH5 211 aa9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Maged1Q9QYH6 775 aaKnown RBP9.39□□□□□ -0.91
Trim39-201ENSMUST00000042717 Kng1O08677 661 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 PurbO35295 324 aaKnown RBP9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 IapP03975 557 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms