RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 PdiltQ9DAN1 588 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cul1Q9WTX6 776 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 CalrP14211 416 aaKnown RBP12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 PltpP55065 493 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rnf40Q3U319 1001 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pop1Q8K205 1045 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Nudt12Q9DCN1 462 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Scn7aB1AYL1 1681 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mmrn1B2RPV6 1210 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Xbp1O35426 267 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Eef1bO70251 225 aaKnown RBP12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ptpn12P35831 775 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Sox10Q04888 466 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Tmem35bQ3U0Y2 150 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Spata24Q6P926 205 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 HgsQ99LI8 775 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 MymkQ9D1N4 221 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gucy1a3Q9ERL9 691 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Golga5Q9QYE6 729 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Lrriq4A6H6A4 596 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Slc35g2D3YVE8 412 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pfdn6Q03958 127 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ccdc110Q3V125 848 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Znf532Q6NXK2 1036 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ccdc154Q6RUT8 657 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mmtag2Q99LX5 260 aaKnown RBP12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Q9CYI0 393 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rnf103Q9R1W3 683 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pnpla6Q3TRM4 1355 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 TprnA2AI08 749 aaKnown RBP12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 SelenovD3YXG1 328 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gucy2eP52785 1108 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Psmc6P62334 389 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Snip1Q8BIZ6 383 aaKnown RBP12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pak4Q8BTW9 593 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Arhgap24Q8C4V1 747 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Washc1Q8VDD8 475 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Bzw1Q9CQC6 419 aaKnown RBP12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Prpsap1Q9D0M1 356 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 PfkpQ9WUA3 784 aaKnown RBP12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Zscan4-ps3A0A1B0GRH6 506 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Zscan4-ps2A0A1C7CYU6 506 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cdr2lA2A6T1 465 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Itgb5O70309 798 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 OsbpQ3B7Z2 805 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Prpf31Q8CCF0 499 aaKnown RBP12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Bud13Q8R149 637 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pqbp1Q91VJ5 263 aaKnown RBP12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Snx24Q9CRB0 169 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cpb2Q9JHH6 422 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ptgs2Q05769 604 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mrgprb8Q7TN51 330 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 A430089I19RikQ8C9W1 407 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ccdc70Q9D9B0 223 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 ParvaQ9EPC1 372 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ddx24Q9ESV0 857 aaKnown RBP12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rasgrp1Q9Z1S3 795 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ric1Q69ZJ7 1422 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cdr1E9Q0B4 517 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Klrk1O54709 232 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ndufs6P52503 116 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pla2g6P97819 807 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Phf20l1Q8CCJ9 1013 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Nr1h3Q9Z0Y9 445 aa12.63□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Zfand4D3Z3C6 739 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Aknad1E9Q8N6 675 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Klhdc9Q3USL1 350 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rhot1Q8BG51 631 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gbp5Q8CFB4 590 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Chn1Q91V57 459 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Bag2Q91YN9 210 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Bap1Q99PU7 728 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Klra17Q9JMA4 273 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 AurkbO70126 345 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Alkbh1P0CB42 389 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Krt26Q3TRJ4 462 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Trim38Q5SZ99 471 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Klhl38Q8BSF5 581 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gpc5Q8CAL5 572 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cmtr1Q9DBC3 837 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Xab2Q9DCD2 855 aaKnown RBP12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Txnrd2Q9JLT4 524 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Sept6Q9R1T4 434 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mtmr9Q9Z2D0 545 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm6370A0A0G2JGX9 315 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Akap17bA2A3V1 959 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm4307E9PZY4 289 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm3182K7N6T8 263 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm4312K9J7E2 289 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm6309L7N481 315 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 BhmtO35490 407 aaKnown RBP12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 CraddO88843 199 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Trim80Q3V061 624 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Tbc1d10bQ8BHL3 798 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Psmd6Q99JI4 389 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Dhx30Q99PU8 1217 aaKnown RBP12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Morc1Q9WVL5 950 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Etnk2A7MCT6 385 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mmp10O55123 476 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Vil1Q62468 827 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms