RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 FdpsQ920E5 353 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Nsmce3Q9CPR8 279 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Gbp11A9YVJ5 442 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Morc3F7BJB9 942 aaKnown RBP24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Prkg1P0C605 671 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Papd5Q68ED3 633 aaKnown RBP24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Bfsp2Q6NVD9 416 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Trim9Q8C7M3 817 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Tph2Q8CGV2 488 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Dnajc12Q9R022 198 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 MypnQ5DTJ9 1315 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Zfp266E9Q2S7 604 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Chil3O35744 398 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 UrosP51163 265 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Slc12a1P55014 1095 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 HelqQ2VPA6 1069 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Tmem232Q5K6N0 675 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Krr1Q8BGA5 380 aaKnown RBP24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Snrnp27Q8K194 155 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 NelfcdQ922L6 591 aa24.43■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 FancbQ5XJY6 703 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ip6k2Q80V72 448 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Sptlc3Q8BG54 563 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Mtss1Q8R1S4 759 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Defb15Q8R2I5 79 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Cdkl2Q9QUK0 568 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Gm4871D3Z0W7 314 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ap5z1Q3U829 807 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Zcchc18Q8VD24 393 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ddx47Q9CWX9 455 aaKnown RBP24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Serpinb3cA2RSF9 386 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Gm3371F7CQW8 167 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Q14AM7 275 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 AarsQ8BGQ7 968 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Tube1Q9D6T1 475 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Scgb2b18A0A087WPA9 112 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Zfp626A0A0U1RQ84 676 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Eddm13E9Q7F5 164 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Rrp36Q3UFY0 244 aaKnown RBP24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Adgrg6Q6F3F9 1165 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Fbxl5Q8C2S5 690 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Olfr390Q8VEZ7 311 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Zbtb1Q91VL9 713 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ndufb9Q9CQJ8 179 aa24.42■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Lrrc38A2VDH3 298 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Tatdn3Q3U1C6 294 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Hoxa13Q62424 386 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Actl9Q8CG27 415 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 PdxkQ8K183 312 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Veph1A1A535 833 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 ItgaeQ60677 1167 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 ThtpaQ8JZL3 224 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Zfp566Q8VCI1 386 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Chordc1Q9D1P4 331 aaKnown RBP24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Aff1O88573 1216 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Hcn2O88703 863 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Npas2P97460 816 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Dpf2Q61103 391 aaKnown RBP24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Fndc3aQ8BX90 1198 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Lrrc59Q922Q8 307 aaKnown RBP24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Trim65Q8BFW4 522 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Cdc42bpgQ80UW5 1551 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Plekhg4A0A1L1SU27 1217 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Gm3460E9QAI8 215 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Eif3eP60229 445 aaKnown RBP24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Atp6v1b1Q91YH6 513 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Rasgrp1Q9Z1S3 795 aa24.41■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 4930469K13RikA0A286YDB2 92 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 ChiaQ91XA9 473 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Polr3eQ9CZT4 710 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Phf2Q9WTU0 1096 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Myo3aQ8K3H5 1613 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Cep170Q6A065 1588 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Lbhd1A0A087WPA0 259 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 PdgfraP26618 1089 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Fam160a1Q505K2 1081 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 PygmQ9WUB3 842 aaKnown RBP24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Eya4Q9Z191 616 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Prr5lA2AVJ5 370 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Srp72F8VQC1 671 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Gm3424L7N298 263 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Gm8246M0QWX9 263 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ctdnep1Q3TP92 244 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ddx5Q61656 614 aaKnown RBP24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 SucoQ8C341 1250 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ankfn1A0A140LIW7 1083 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ifi207E9Q3L4 978 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Nol4P60954 483 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Serping1P97290 504 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 BegainQ68EF6 600 aa24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Pdxdc1Q99K01 787 aaKnown RBP24.4■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 MeiocA2AG06 965 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Patl2A2ARM1 529 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 A530032D15RikE9Q422 215 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Hspa9P38647 679 aaKnown RBP24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Cep295nlQ497N6 533 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 NvlQ9DBY8 855 aaKnown RBP24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 CrotQ9DC50 612 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Farp1F8VPU2 1048 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 C130060K24RikG3UWA8 416 aa24.39■■□□□ 1.5
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms