RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Myl1P05977 188 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Nub1P54729 614 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Ndufaf2Q59J78 168 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Dph1Q5NCQ5 438 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Ssxb5Q6XAS2 159 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Ddx42Q810A7 929 aaKnown RBP13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Rhot1Q8BG51 631 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Gnl3Q8CI11 538 aaKnown RBP13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Slc12a8Q8VI23 705 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Kif13aQ9EQW7 1749 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Krt36B1AQ75 473 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 C130060K24RikG3UWA8 416 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 KitP05532 979 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Tex11Q14AT2 947 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Spout1Q3UHX9 385 aaKnown RBP13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 CpQ61147 1061 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Usp8Q80U87 1080 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Ppp1r16bQ8VHQ3 568 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 Rilpl1Q9JJC6 406 aa13.47□□□□□ -0.25
Msh6-201ENSMUST00000005503 AdgbG3UZ78 1657 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Fam171a1A2ATK9 892 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Slurp2P0DP59 97 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Scp2P32020 547 aaKnown RBP13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 NppbP40753 121 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Pon1P52430 355 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Arl4cP61208 192 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 RalaP63321 206 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Pkn1P70268 946 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Lrch2Q3UMG5 773 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Sh3gl2Q62420 352 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Naif1Q6PFD7 327 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Scfd2Q8BTY8 684 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 YarsQ91WQ3 528 aaKnown RBP13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Nek8Q91ZR4 698 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Gadd45gQ9Z111 159 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Crb1Q8VHS2 1405 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Slc27a2O35488 620 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Ets2P15037 468 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Ptk2P34152 1090 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Fam92bQ3V2J0 292 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Chmp2bQ8BJF9 213 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 A430089I19RikQ8C9W1 407 aa13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Rbm6S4R1W5 1118 aaKnown RBP13.46□□□□□ -0.25
Msh6-201ENSMUST00000005503 Slit2Q9R1B9 1521 aa13.46□□□□□ -0.26
Msh6-201ENSMUST00000005503 Svs3aF2Z472 265 aa13.46□□□□□ -0.26
Msh6-201ENSMUST00000005503 PtenO08586 403 aa13.46□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ephb2P54763 986 aa13.46□□□□□ -0.26
Msh6-201ENSMUST00000005503 Kcnt1Q6ZPR4 1224 aa13.46□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ddhd1Q80YA3 547 aa13.46□□□□□ -0.26
Msh6-201ENSMUST00000005503 Psip1Q99JF8 528 aaKnown RBP13.46□□□□□ -0.26
Msh6-201ENSMUST00000005503 Rtl9Q32KG4 1339 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Gm13084A2A8N0 494 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Lrrc63A6H694 637 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Aco1P28271 889 aaKnown RBP13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Casp2P29594 452 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 IntS13Q8QZV7 732 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ttc1Q91Z38 292 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Tlr3Q99MB1 905 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Pla2g12bQ99P27 195 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 4930519G04RikQ9CPT7 205 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Chordc1Q9D1P4 331 aaKnown RBP13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Syap1Q9D5V6 365 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Scgb2b12S4R2L0 112 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Adgrb1Q3UHD1 1582 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Rfx8D3YU81 596 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Tnnc2P20801 160 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Sema3eP70275 775 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Pou6f1Q07916 301 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Srrm1Q52KI8 946 aaKnown RBP13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 FdxrQ61578 494 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Hsph1Q61699 858 aaKnown RBP13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ankrd6Q69ZU8 712 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Jade1Q6ZPI0 834 aaKnown RBP13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ubxn6Q99PL6 442 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Trim42Q9D2H5 723 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Slit3Q9WVB4 1523 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Patl2A2ARM1 529 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Fam47eD3YWC7 402 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 FerP70451 823 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ppp4cP97470 307 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Muc3aQ3U5A2 218 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Vil1Q62468 827 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Zfp341Q6PGC9 846 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 DaglaQ6WQJ1 1044 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Wdr91Q7TMQ7 748 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Zdhhc14Q8BQQ1 489 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Atp6v1b1Q91YH6 513 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Zfyve19Q9DAZ9 389 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Hsd3b7Q9EQC1 369 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 CtsfQ9R013 462 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Plod1Q9R0E2 728 aa13.45□□□□□ -0.26
Msh6-201ENSMUST00000005503 Mocs3A2BDX3 460 aaKnown RBP13.44□□□□□ -0.26
Msh6-201ENSMUST00000005503 Abcb5B5X0E4 1255 aa13.44□□□□□ -0.26
Msh6-201ENSMUST00000005503 R3hdm1E9Q9Q2 1135 aaKnown RBP13.44□□□□□ -0.26
Msh6-201ENSMUST00000005503 Exoc7O35250 697 aa13.44□□□□□ -0.26
Msh6-201ENSMUST00000005503 Vamp7P70280 220 aa13.44□□□□□ -0.26
Msh6-201ENSMUST00000005503 Trim43bP86448 445 aa13.44□□□□□ -0.26
Msh6-201ENSMUST00000005503 Trim43cP86449 446 aa13.44□□□□□ -0.26
Msh6-201ENSMUST00000005503 Ppp2r5aQ6PD03 486 aa13.44□□□□□ -0.26
Msh6-201ENSMUST00000005503 Fbxl13Q8CDU4 790 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms