RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 FCY21P40039 528 aa1.19□□□□□ -2.22
snR54snR54 UTP25P40498 721 aaKnown RBP1.19□□□□□ -2.22
snR54snR54 AVT7P40501 490 aa1.19□□□□□ -2.22
snR54snR54 YJL027CP47063 138 aaPredicted RBP1.19□□□□□ -2.22
snR54snR54 OST3P48439 350 aa1.19□□□□□ -2.22
snR54snR54 SLM2P53955 656 aa1.19□□□□□ -2.22
snR54snR54 MYO5Q04439 1219 aaKnown RBP1.19□□□□□ -2.22
snR54snR54 YMR111CQ04461 462 aaPredicted RBP1.19□□□□□ -2.22
snR54snR54 TAZ1Q06510 381 aa1.19□□□□□ -2.22
snR54snR54 YLL007CQ07799 665 aa1.19□□□□□ -2.22
snR54snR54 RAD7P06779 565 aa1.18□□□□□ -2.22
snR54snR54 SPL2P38839 148 aa1.18□□□□□ -2.22
snR54snR54 SUR2P38992 349 aa1.18□□□□□ -2.22
snR54snR54 POP2P39008 433 aa1.18□□□□□ -2.22
snR54snR54 GDS1P41913 522 aa1.18□□□□□ -2.22
snR54snR54 DCR2Q05924 578 aa1.18□□□□□ -2.22
snR54snR54 YOR268CQ08734 132 aa1.18□□□□□ -2.22
snR54snR54 SAM4Q08985 325 aaKnown RBP1.18□□□□□ -2.22
snR54snR54 RAD10P06838 210 aa1.17□□□□□ -2.22
snR54snR54 RPL31AP0C2H8 113 aaKnown RBP1.17□□□□□ -2.22
snR54snR54 VPH1P32563 840 aaKnown RBP1.17□□□□□ -2.22
snR54snR54 SEN34P39707 275 aa1.17□□□□□ -2.22
snR54snR54 NAS2P40555 220 aa1.17□□□□□ -2.22
snR54snR54 SWC4P53201 476 aa1.17□□□□□ -2.22
snR54snR54 APC9Q12107 265 aa1.17□□□□□ -2.22
snR54snR54 OSM1P21375 501 aaKnown RBP1.16□□□□□ -2.22
snR54snR54 COT1P32798 439 aa1.16□□□□□ -2.22
snR54snR54 FET3P38993 636 aa1.16□□□□□ -2.22
snR54snR54 YFR054CP43622 192 aa1.16□□□□□ -2.22
snR54snR54 RPE1P46969 238 aa1.16□□□□□ -2.22
snR54snR54 CAB4P53332 305 aa1.16□□□□□ -2.22
snR54snR54 YPL039WQ03080 316 aa1.16□□□□□ -2.22
snR54snR54 SPO77Q06134 477 aa1.16□□□□□ -2.22
snR54snR54 YOL019WQ08157 551 aa1.16□□□□□ -2.22
snR54snR54 IZH4Q99393 312 aa1.16□□□□□ -2.22
snR54snR54 FKS1P38631 1876 aaKnown RBP1.16□□□□□ -2.22
snR54snR54 TOM40P23644 387 aaKnown RBP1.15□□□□□ -2.23
snR54snR54 ATG15P25641 520 aa1.15□□□□□ -2.23
snR54snR54 SMI1P32566 505 aa1.15□□□□□ -2.23
snR54snR54 POP8P38208 133 aa1.15□□□□□ -2.23
snR54snR54 AIM20P40451 204 aa1.15□□□□□ -2.23
snR54snR54 MND1P53102 219 aa1.15□□□□□ -2.23
snR54snR54 YOR114WQ12219 294 aa1.15□□□□□ -2.23
snR54snR54 YPR1Q12458 312 aa1.15□□□□□ -2.23
snR54snR54 YPR064WQ12492 139 aa1.15□□□□□ -2.23
snR54snR54 YBL112CQ3E7Y4 105 aa1.15□□□□□ -2.23
snR54snR54 AEP1P32493 518 aa1.14□□□□□ -2.23
snR54snR54 PHO89P38361 574 aa1.14□□□□□ -2.23
snR54snR54 GRE3P38715 327 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
snR54snR54 SHQ1P40486 507 aaPredicted RBP1.14□□□□□ -2.23
snR54snR54 YPT32P51996 222 aaKnown RBP1.14□□□□□ -2.23
snR54snR54 COS6P53344 381 aa1.14□□□□□ -2.23
snR54snR54 DPP1Q05521 289 aa1.14□□□□□ -2.23
snR54snR54 RTC5Q12108 567 aaKnown RBP1.14□□□□□ -2.23
snR54snR54 YPL150WQ12152 901 aa1.14□□□□□ -2.23
snR54snR54 RRP42Q12277 265 aaPredicted RBP1.14□□□□□ -2.23
snR54snR54 PAA1Q12447 191 aaKnown RBP1.14□□□□□ -2.23
snR54snR54 CAT2P32796 670 aaKnown RBP1.13□□□□□ -2.23
snR54snR54 SWC5P38326 303 aa1.13□□□□□ -2.23
snR54snR54 YHR045WP38775 560 aa1.13□□□□□ -2.23
snR54snR54 LSM4P40070 187 aaKnown RBP1.13□□□□□ -2.23
snR54snR54 CAB5Q03941 241 aa1.13□□□□□ -2.23
snR54snR54 ERG2P32352 222 aa1.12□□□□□ -2.23
snR54snR54 APE4P38821 490 aa1.12□□□□□ -2.23
snR54snR54 CAJ1P39101 391 aa1.12□□□□□ -2.23
snR54snR54 EMC6Q12431 108 aa1.12□□□□□ -2.23
snR54snR54 ISD11Q6Q560 94 aa1.12□□□□□ -2.23
snR54snR54 TDH1P00360 332 aaKnown RBP1.11□□□□□ -2.23
snR54snR54 TFS1P14306 219 aa1.11□□□□□ -2.23
snR54snR54 YCR102CP25608 368 aa1.11□□□□□ -2.23
snR54snR54 RPS0AP32905 252 aaKnown RBP1.11□□□□□ -2.23
snR54snR54 SWD2P36104 329 aaPredicted RBP1.11□□□□□ -2.23
snR54snR54 ARN2P38724 620 aa1.11□□□□□ -2.23
snR54snR54 COG3P40094 801 aa1.11□□□□□ -2.23
snR54snR54 GON7P46984 123 aa1.11□□□□□ -2.23
snR54snR54 ECM18Q04623 453 aa1.11□□□□□ -2.23
snR54snR54 NOT5Q12514 560 aaPredicted RBP1.11□□□□□ -2.23
snR54snR54 YEL009C-AA0A023PZF2 135 aa1.1□□□□□ -2.23
snR54snR54 CDC37P06101 506 aaKnown RBP1.1□□□□□ -2.23
snR54snR54 KRE6P32486 720 aa1.1□□□□□ -2.23
snR54snR54 SPT4P32914 102 aaPredicted RBP1.1□□□□□ -2.23
snR54snR54 YOR062CP36025 268 aa1.1□□□□□ -2.23
snR54snR54 RPC37P36121 282 aa1.1□□□□□ -2.23
snR54snR54 UIP5P36137 443 aa1.1□□□□□ -2.23
snR54snR54 YDR089WP38966 869 aa1.1□□□□□ -2.23
snR54snR54 MRPL49P40858 161 aaPredicted RBP1.1□□□□□ -2.23
snR54snR54 YJL016WP47072 561 aa1.1□□□□□ -2.23
snR54snR54 FMP41P53889 259 aaKnown RBP1.1□□□□□ -2.23
snR54snR54 EBS1Q03466 884 aaKnown RBP1.1□□□□□ -2.23
snR54snR54 YML018CQ03730 393 aa1.1□□□□□ -2.23
snR54snR54 YMR114CQ04471 368 aaKnown RBP1.1□□□□□ -2.23
snR54snR54 CAR2P07991 424 aaKnown RBP1.09□□□□□ -2.23
snR54snR54 MSS116P15424 664 aaKnown RBP1.09□□□□□ -2.23
snR54snR54 SUA5P32579 426 aa1.09□□□□□ -2.23
snR54snR54 END3P39013 349 aa1.09□□□□□ -2.23
snR54snR54 MPP10P47083 593 aaKnown RBP1.09□□□□□ -2.23
snR54snR54 RIB4P50861 169 aaPredicted RBP1.09□□□□□ -2.23
snR54snR54 COG7P53195 279 aa1.09□□□□□ -2.23
snR54snR54 YMR209CQ03648 457 aa1.09□□□□□ -2.23
snR54snR54 LOA1Q06508 300 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms