RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W CDC13P32797 924 aaKnown RBP1.41□□□□□ -2.18
DDR48YMR173W IMP3P32899 183 aaPredicted RBP1.41□□□□□ -2.18
DDR48YMR173W TPO5P36029 618 aa1.41□□□□□ -2.18
DDR48YMR173W NRG2P38082 220 aa1.41□□□□□ -2.18
DDR48YMR173W YPC1P38298 316 aa1.41□□□□□ -2.18
DDR48YMR173W POP2P39008 433 aa1.41□□□□□ -2.18
DDR48YMR173W VAB2P40003 282 aa1.41□□□□□ -2.18
DDR48YMR173W PIR5P46999 287 aa1.41□□□□□ -2.18
DDR48YMR173W PRP24P49960 444 aaKnown RBP1.41□□□□□ -2.18
DDR48YMR173W RIB4P50861 169 aaPredicted RBP1.41□□□□□ -2.18
DDR48YMR173W MND1P53102 219 aa1.41□□□□□ -2.18
DDR48YMR173W SWC4P53201 476 aa1.41□□□□□ -2.18
DDR48YMR173W BIO4P53630 237 aa1.41□□□□□ -2.18
DDR48YMR173W MYO5Q04439 1219 aaKnown RBP1.41□□□□□ -2.18
DDR48YMR173W FCF1Q05498 189 aaPredicted RBP1.41□□□□□ -2.18
DDR48YMR173W YPL278CQ08990 100 aa1.41□□□□□ -2.18
DDR48YMR173W AGC1Q12482 902 aa1.41□□□□□ -2.18
DDR48YMR173W CAR2P07991 424 aaKnown RBP1.4□□□□□ -2.19
DDR48YMR173W RPL31AP0C2H8 113 aaKnown RBP1.4□□□□□ -2.19
DDR48YMR173W YCR025CP25352 136 aa1.4□□□□□ -2.19
DDR48YMR173W KRR1P25586 316 aaPredicted RBP1.4□□□□□ -2.19
DDR48YMR173W MBA1P38300 278 aa1.4□□□□□ -2.19
DDR48YMR173W YDR089WP38966 869 aa1.4□□□□□ -2.19
DDR48YMR173W SUR2P38992 349 aa1.4□□□□□ -2.19
DDR48YMR173W CDC40P40968 455 aaPredicted RBP1.4□□□□□ -2.19
DDR48YMR173W MPP10P47083 593 aaKnown RBP1.4□□□□□ -2.19
DDR48YMR173W YJR146WP47174 117 aa1.4□□□□□ -2.19
DDR48YMR173W DSK2P48510 373 aa1.4□□□□□ -2.19
DDR48YMR173W DBP6P53734 629 aaKnown RBP1.4□□□□□ -2.19
DDR48YMR173W ABZ2Q03266 374 aa1.4□□□□□ -2.19
DDR48YMR173W YMR111CQ04461 462 aaPredicted RBP1.4□□□□□ -2.19
DDR48YMR173W DCR2Q05924 578 aa1.4□□□□□ -2.19
DDR48YMR173W CTS2Q06350 511 aa1.4□□□□□ -2.19
DDR48YMR173W APC9Q12107 265 aa1.4□□□□□ -2.19
DDR48YMR173W RTC5Q12108 567 aaKnown RBP1.4□□□□□ -2.19
DDR48YMR173W ATG5Q12380 294 aa1.4□□□□□ -2.19
DDR48YMR173W IZH4Q99393 312 aa1.4□□□□□ -2.19
DDR48YMR173W SAR1P20606 190 aaKnown RBP1.39□□□□□ -2.19
DDR48YMR173W OSM1P21375 501 aaKnown RBP1.39□□□□□ -2.19
DDR48YMR173W RPL5P26321 297 aaKnown RBP1.39□□□□□ -2.19
DDR48YMR173W SWD2P36104 329 aaPredicted RBP1.39□□□□□ -2.19
DDR48YMR173W SPL2P38839 148 aa1.39□□□□□ -2.19
DDR48YMR173W OSW5P40219 148 aa1.39□□□□□ -2.19
DDR48YMR173W YIL012WP40551 113 aa1.39□□□□□ -2.19
DDR48YMR173W GDS1P41913 522 aa1.39□□□□□ -2.19
DDR48YMR173W LOH1P47055 219 aa1.39□□□□□ -2.19
DDR48YMR173W COX16P47081 118 aa1.39□□□□□ -2.19
DDR48YMR173W DAN1P47178 298 aa1.39□□□□□ -2.19
DDR48YMR173W SPO77Q06134 477 aa1.39□□□□□ -2.19
DDR48YMR173W CUR1Q06469 252 aa1.39□□□□□ -2.19
DDR48YMR173W REX3Q12090 404 aa1.39□□□□□ -2.19
DDR48YMR173W SIA1Q12212 622 aa1.39□□□□□ -2.19
DDR48YMR173W RAD7P06779 565 aa1.38□□□□□ -2.19
DDR48YMR173W GCD2P12754 651 aaPredicted RBP1.38□□□□□ -2.19
DDR48YMR173W IMP1P28627 190 aa1.38□□□□□ -2.19
DDR48YMR173W YHR045WP38775 560 aa1.38□□□□□ -2.19
DDR48YMR173W KRE29P40026 464 aa1.38□□□□□ -2.19
DDR48YMR173W TPN1P53099 579 aa1.38□□□□□ -2.19
DDR48YMR173W VOA1P53262 265 aa1.38□□□□□ -2.19
DDR48YMR173W YMR166CQ03829 368 aa1.38□□□□□ -2.19
DDR48YMR173W RRG8Q06109 277 aa1.38□□□□□ -2.19
DDR48YMR173W TAZ1Q06510 381 aa1.38□□□□□ -2.19
DDR48YMR173W VAC14Q06708 880 aa1.38□□□□□ -2.19
DDR48YMR173W RRP42Q12277 265 aaPredicted RBP1.38□□□□□ -2.19
DDR48YMR173W YPR064WQ12492 139 aa1.38□□□□□ -2.19
DDR48YMR173W STF1P01098 86 aa1.37□□□□□ -2.19
DDR48YMR173W AEP1P32493 518 aa1.37□□□□□ -2.19
DDR48YMR173W COY1P34237 679 aa1.37□□□□□ -2.19
DDR48YMR173W YKL063CP35725 167 aa1.37□□□□□ -2.19
DDR48YMR173W MNN9P39107 395 aaKnown RBP1.37□□□□□ -2.19
DDR48YMR173W COG3P40094 801 aa1.37□□□□□ -2.19
DDR48YMR173W SHQ1P40486 507 aaPredicted RBP1.37□□□□□ -2.19
DDR48YMR173W MRPL49P40858 161 aaPredicted RBP1.37□□□□□ -2.19
DDR48YMR173W LOC1P43586 204 aaPredicted RBP1.37□□□□□ -2.19
DDR48YMR173W YPT32P51996 222 aaKnown RBP1.37□□□□□ -2.19
DDR48YMR173W COS6P53344 381 aa1.37□□□□□ -2.19
DDR48YMR173W SUE1Q06524 206 aa1.37□□□□□ -2.19
DDR48YMR173W YLL007CQ07799 665 aa1.37□□□□□ -2.19
DDR48YMR173W ATP6P00854 259 aa1.36□□□□□ -2.19
DDR48YMR173W RPC37P36121 282 aa1.36□□□□□ -2.19
DDR48YMR173W FCY21P40039 528 aa1.36□□□□□ -2.19
DDR48YMR173W AVT7P40501 490 aa1.36□□□□□ -2.19
DDR48YMR173W GTO1P48239 356 aa1.36□□□□□ -2.19
DDR48YMR173W MRS2Q01926 470 aa1.36□□□□□ -2.19
DDR48YMR173W YPL077CQ02831 240 aa1.36□□□□□ -2.19
DDR48YMR173W ASR1Q06834 288 aa1.36□□□□□ -2.19
DDR48YMR173W RDS3Q06835 107 aaPredicted RBP1.36□□□□□ -2.19
DDR48YMR173W YOR268CQ08734 132 aa1.36□□□□□ -2.19
DDR48YMR173W YOR114WQ12219 294 aa1.36□□□□□ -2.19
DDR48YMR173W EMC6Q12431 108 aa1.36□□□□□ -2.19
DDR48YMR173W TFS1P14306 219 aa1.35□□□□□ -2.19
DDR48YMR173W RPS0AP32905 252 aaKnown RBP1.35□□□□□ -2.19
DDR48YMR173W SPT4P32914 102 aaPredicted RBP1.35□□□□□ -2.19
DDR48YMR173W RPC25P35718 212 aa1.35□□□□□ -2.19
DDR48YMR173W GRE3P38715 327 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
DDR48YMR173W VPS45P38932 577 aa1.35□□□□□ -2.19
DDR48YMR173W SWT21P53873 357 aaPredicted RBP1.35□□□□□ -2.19
DDR48YMR173W EBS1Q03466 884 aaKnown RBP1.35□□□□□ -2.19
DDR48YMR173W GRH1Q04410 372 aaKnown RBP1.35□□□□□ -2.19
DDR48YMR173W DPP1Q05521 289 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms