RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C AGE1Q04412 482 aa6.78□□□□□ -1.32
AFG2YLR397C NUT2Q06213 157 aa6.78□□□□□ -1.32
AFG2YLR397C SIA1Q12212 622 aa6.78□□□□□ -1.32
AFG2YLR397C TIR4Q12218 487 aaPredicted RBP6.78□□□□□ -1.32
AFG2YLR397C ISA2Q12425 185 aa6.78□□□□□ -1.32
AFG2YLR397C ILV1P00927 576 aaKnown RBP6.77□□□□□ -1.33
AFG2YLR397C HAP2P06774 265 aa6.77□□□□□ -1.33
AFG2YLR397C SCH9P11792 824 aaKnown RBP6.77□□□□□ -1.33
AFG2YLR397C RPB5P20434 215 aa6.77□□□□□ -1.33
AFG2YLR397C PRE9P23638 258 aaKnown RBP6.77□□□□□ -1.33
AFG2YLR397C RRN10P38204 145 aa6.77□□□□□ -1.33
AFG2YLR397C YHL041WP38730 149 aa6.77□□□□□ -1.33
AFG2YLR397C HTD2P38790 280 aaKnown RBP6.77□□□□□ -1.33
AFG2YLR397C PRP39P39682 629 aaKnown RBP6.77□□□□□ -1.33
AFG2YLR397C ARG2P40360 574 aa6.77□□□□□ -1.33
AFG2YLR397C POG1P40473 351 aa6.77□□□□□ -1.33
AFG2YLR397C SEC24P40482 926 aaKnown RBP6.77□□□□□ -1.33
AFG2YLR397C MAF1P41910 395 aa6.77□□□□□ -1.33
AFG2YLR397C THI12P42883 340 aa6.77□□□□□ -1.33
AFG2YLR397C THI5P43534 340 aa6.77□□□□□ -1.33
AFG2YLR397C LYS5P50113 272 aa6.77□□□□□ -1.33
AFG2YLR397C FRE4P53746 719 aa6.77□□□□□ -1.33
AFG2YLR397C AAH1P53909 347 aa6.77□□□□□ -1.33
AFG2YLR397C YMR253CQ04835 414 aa6.77□□□□□ -1.33
AFG2YLR397C ECM22Q05958 814 aaPredicted RBP6.77□□□□□ -1.33
AFG2YLR397C ATG10Q07879 167 aa6.77□□□□□ -1.33
AFG2YLR397C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
AFG2YLR397C WTM2Q12206 467 aa6.77□□□□□ -1.33
AFG2YLR397C SUL2Q12325 893 aa6.77□□□□□ -1.33
AFG2YLR397C CDC42P19073 191 aa6.77□□□□□ -1.33
AFG2YLR397C IMG2P25642 146 aaPredicted RBP6.77□□□□□ -1.33
AFG2YLR397C MRP17P28778 131 aa6.77□□□□□ -1.33
AFG2YLR397C TMT1P32643 299 aa6.77□□□□□ -1.33
AFG2YLR397C GAA1P39012 614 aa6.77□□□□□ -1.33
AFG2YLR397C GDH1P07262 454 aaKnown RBP6.76□□□□□ -1.33
AFG2YLR397C HSP26P15992 214 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
AFG2YLR397C KIN82P25341 720 aa6.76□□□□□ -1.33
AFG2YLR397C PHO91P27514 894 aa6.76□□□□□ -1.33
AFG2YLR397C YAL037WP39728 267 aa6.76□□□□□ -1.33
AFG2YLR397C SLZ1P40167 298 aa6.76□□□□□ -1.33
AFG2YLR397C ZAP1P47043 880 aa6.76□□□□□ -1.33
AFG2YLR397C NNF1P47149 201 aa6.76□□□□□ -1.33
AFG2YLR397C YMR130WQ04223 302 aa6.76□□□□□ -1.33
AFG2YLR397C RRI1Q12468 440 aa6.76□□□□□ -1.33
AFG2YLR397C FRE6Q12473 712 aa6.76□□□□□ -1.33
AFG2YLR397C HKR1P41809 1802 aa6.76□□□□□ -1.33
AFG2YLR397C SAL1D6W196 494 aa6.76□□□□□ -1.33
AFG2YLR397C NHP6BP11633 99 aaKnown RBP6.76□□□□□ -1.33
AFG2YLR397C AIM17P23180 465 aaKnown RBP6.76□□□□□ -1.33
AFG2YLR397C YCL068CP25593 260 aa6.76□□□□□ -1.33
AFG2YLR397C YEF1P32622 495 aa6.76□□□□□ -1.33
AFG2YLR397C CLB6P32943 380 aa6.76□□□□□ -1.33
AFG2YLR397C SHO1P40073 367 aa6.76□□□□□ -1.33
AFG2YLR397C BMT5P40493 336 aa6.76□□□□□ -1.33
AFG2YLR397C BUL1P48524 976 aa6.76□□□□□ -1.33
AFG2YLR397C TRM44Q02648 567 aaKnown RBP6.76□□□□□ -1.33
AFG2YLR397C RKI1Q12189 258 aa6.76□□□□□ -1.33
AFG2YLR397C TIP20P33891 701 aa6.75□□□□□ -1.33
AFG2YLR397C DOA1P36037 715 aa6.75□□□□□ -1.33
AFG2YLR397C OMA1P36163 345 aa6.75□□□□□ -1.33
AFG2YLR397C FIG1P38224 298 aa6.75□□□□□ -1.33
AFG2YLR397C ZTA1P38230 334 aaKnown RBP6.75□□□□□ -1.33
AFG2YLR397C YPT31P38555 223 aaKnown RBP6.75□□□□□ -1.33
AFG2YLR397C YER121WP40076 114 aa6.75□□□□□ -1.33
AFG2YLR397C PUS6P53294 404 aa6.75□□□□□ -1.33
AFG2YLR397C ASI3P53983 676 aa6.75□□□□□ -1.33
AFG2YLR397C ECM18Q04623 453 aa6.75□□□□□ -1.33
AFG2YLR397C YMR315WQ04869 349 aaKnown RBP6.75□□□□□ -1.33
AFG2YLR397C YKL033W-AQ86ZR7 236 aa6.75□□□□□ -1.33
AFG2YLR397C UBR2Q07963 1872 aa6.75□□□□□ -1.33
AFG2YLR397C TPI1P00942 248 aaKnown RBP6.75□□□□□ -1.33
AFG2YLR397C MSK1P32048 576 aa6.75□□□□□ -1.33
AFG2YLR397C YKL075CP36083 450 aa6.75□□□□□ -1.33
AFG2YLR397C AME1P38313 324 aa6.75□□□□□ -1.33
AFG2YLR397C YIL067CP40514 678 aa6.75□□□□□ -1.33
AFG2YLR397C SMK1P41808 388 aa6.75□□□□□ -1.33
AFG2YLR397C MOB2P43563 287 aa6.75□□□□□ -1.33
AFG2YLR397C NET1P47035 1189 aa6.75□□□□□ -1.33
AFG2YLR397C LCL3P53153 274 aa6.75□□□□□ -1.33
AFG2YLR397C DUO1P53168 247 aaKnown RBP6.75□□□□□ -1.33
AFG2YLR397C ATC1Q04005 294 aa6.75□□□□□ -1.33
AFG2YLR397C ATG41Q12048 136 aa6.75□□□□□ -1.33
AFG2YLR397C PST1Q12355 444 aa6.75□□□□□ -1.33
AFG2YLR397C TIF6Q12522 245 aaKnown RBP6.75□□□□□ -1.33
AFG2YLR397C APE1P14904 514 aa6.74□□□□□ -1.33
AFG2YLR397C LSM5P40089 93 aaKnown RBP6.74□□□□□ -1.33
AFG2YLR397C FMC1P40491 155 aa6.74□□□□□ -1.33
AFG2YLR397C FET4P40988 552 aa6.74□□□□□ -1.33
AFG2YLR397C RPA43P46669 326 aa6.74□□□□□ -1.33
AFG2YLR397C AIM25P47140 327 aa6.74□□□□□ -1.33
AFG2YLR397C SKP1P52286 194 aa6.74□□□□□ -1.33
AFG2YLR397C YNR029CP53729 429 aaKnown RBP6.74□□□□□ -1.33
AFG2YLR397C SMX3P54999 86 aaPredicted RBP6.74□□□□□ -1.33
AFG2YLR397C DIG2Q03373 323 aaKnown RBP6.74□□□□□ -1.33
AFG2YLR397C EMI1Q04406 187 aa6.74□□□□□ -1.33
AFG2YLR397C ARO2P28777 376 aaKnown RBP6.73□□□□□ -1.33
AFG2YLR397C MET22P32179 357 aa6.73□□□□□ -1.33
AFG2YLR397C IRS4P36115 615 aaKnown RBP6.73□□□□□ -1.33
AFG2YLR397C ICS2P38284 255 aa6.73□□□□□ -1.33
AFG2YLR397C NTA1P40354 457 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms