RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C AEP1P32493 518 aa2.31□□□□□ -2.04
SMD3YLR147C CAB3P36076 571 aa2.31□□□□□ -2.04
SMD3YLR147C SWD2P36104 329 aaPredicted RBP2.31□□□□□ -2.04
SMD3YLR147C AVT7P40501 490 aa2.31□□□□□ -2.04
SMD3YLR147C COX16P47081 118 aa2.31□□□□□ -2.04
SMD3YLR147C YPT32P51996 222 aaKnown RBP2.31□□□□□ -2.04
SMD3YLR147C ALG9P53868 555 aaKnown RBP2.31□□□□□ -2.04
SMD3YLR147C MRS2Q01926 470 aa2.31□□□□□ -2.04
SMD3YLR147C CUR1Q06469 252 aa2.31□□□□□ -2.04
SMD3YLR147C SNF6P18888 332 aa2.3□□□□□ -2.04
SMD3YLR147C RPL5P26321 297 aaKnown RBP2.3□□□□□ -2.04
SMD3YLR147C ATG12P38316 186 aa2.3□□□□□ -2.04
SMD3YLR147C PIR5P46999 287 aa2.3□□□□□ -2.04
SMD3YLR147C OST3P48439 350 aa2.3□□□□□ -2.04
SMD3YLR147C TVP15Q03860 143 aa2.3□□□□□ -2.04
SMD3YLR147C CDD1Q06549 142 aa2.3□□□□□ -2.04
SMD3YLR147C YPR064WQ12492 139 aa2.3□□□□□ -2.04
SMD3YLR147C YDR089WP38966 869 aa2.29□□□□□ -2.04
SMD3YLR147C SHQ1P40486 507 aaPredicted RBP2.29□□□□□ -2.04
SMD3YLR147C LOH1P47055 219 aa2.29□□□□□ -2.04
SMD3YLR147C SYF2P53277 215 aaPredicted RBP2.29□□□□□ -2.04
SMD3YLR147C RSM27P53305 110 aa2.29□□□□□ -2.04
SMD3YLR147C SIA1Q12212 622 aa2.29□□□□□ -2.04
SMD3YLR147C YOR114WQ12219 294 aa2.29□□□□□ -2.04
SMD3YLR147C RRP42Q12277 265 aaPredicted RBP2.29□□□□□ -2.04
SMD3YLR147C YKL063CP35725 167 aa2.28□□□□□ -2.04
SMD3YLR147C RPC37P36121 282 aa2.28□□□□□ -2.04
SMD3YLR147C OSW5P40219 148 aa2.28□□□□□ -2.04
SMD3YLR147C SWT21P53873 357 aaPredicted RBP2.28□□□□□ -2.04
SMD3YLR147C VAC14Q06708 880 aa2.28□□□□□ -2.04
SMD3YLR147C REX3Q12090 404 aa2.28□□□□□ -2.04
SMD3YLR147C RTC5Q12108 567 aaKnown RBP2.28□□□□□ -2.04
SMD3YLR147C ATP6P00854 259 aa2.27□□□□□ -2.05
SMD3YLR147C OSM1P21375 501 aaKnown RBP2.27□□□□□ -2.05
SMD3YLR147C ATG15P25641 520 aa2.27□□□□□ -2.05
SMD3YLR147C SPL2P38839 148 aa2.27□□□□□ -2.05
SMD3YLR147C SUR2P38992 349 aa2.27□□□□□ -2.05
SMD3YLR147C GTO1P48239 356 aa2.27□□□□□ -2.05
SMD3YLR147C YPL077CQ02831 240 aa2.27□□□□□ -2.05
SMD3YLR147C YML018CQ03730 393 aa2.27□□□□□ -2.05
SMD3YLR147C DPP1Q05521 289 aa2.27□□□□□ -2.05
SMD3YLR147C RRG8Q06109 277 aa2.27□□□□□ -2.05
SMD3YLR147C GCD2P12754 651 aaPredicted RBP2.26□□□□□ -2.05
SMD3YLR147C TFS1P14306 219 aa2.26□□□□□ -2.05
SMD3YLR147C SAR1P20606 190 aaKnown RBP2.26□□□□□ -2.05
SMD3YLR147C KRR1P25586 316 aaPredicted RBP2.26□□□□□ -2.05
SMD3YLR147C COT1P32798 439 aa2.26□□□□□ -2.05
SMD3YLR147C SPT4P32914 102 aaPredicted RBP2.26□□□□□ -2.05
SMD3YLR147C MNN9P39107 395 aaKnown RBP2.26□□□□□ -2.05
SMD3YLR147C LOC1P43586 204 aaPredicted RBP2.26□□□□□ -2.05
SMD3YLR147C VOA1P53262 265 aa2.26□□□□□ -2.05
SMD3YLR147C SSU72P53538 206 aaPredicted RBP2.26□□□□□ -2.05
SMD3YLR147C FCF1Q05498 189 aaPredicted RBP2.26□□□□□ -2.05
SMD3YLR147C RPS0AP32905 252 aaKnown RBP2.25□□□□□ -2.05
SMD3YLR147C SEN34P39707 275 aa2.25□□□□□ -2.05
SMD3YLR147C MNN5P46982 586 aa2.25□□□□□ -2.05
SMD3YLR147C CTS2Q06350 511 aa2.25□□□□□ -2.05
SMD3YLR147C ASR1Q06834 288 aa2.25□□□□□ -2.05
SMD3YLR147C YLL007CQ07799 665 aa2.25□□□□□ -2.05
SMD3YLR147C AGC1Q12482 902 aa2.25□□□□□ -2.05
SMD3YLR147C POP8P38208 133 aa2.24□□□□□ -2.05
SMD3YLR147C LOA1Q06508 300 aa2.24□□□□□ -2.05
SMD3YLR147C PAN1P32521 1480 aa2.24□□□□□ -2.05
SMD3YLR147C PET494P07390 489 aaPredicted RBP2.23□□□□□ -2.05
SMD3YLR147C GPI12P23797 304 aa2.23□□□□□ -2.05
SMD3YLR147C SUA5P32579 426 aa2.23□□□□□ -2.05
SMD3YLR147C CLB6P32943 380 aa2.23□□□□□ -2.05
SMD3YLR147C AGP3P43548 558 aa2.23□□□□□ -2.05
SMD3YLR147C YMR209CQ03648 457 aa2.23□□□□□ -2.05
SMD3YLR147C PLB3Q08108 686 aa2.23□□□□□ -2.05
SMD3YLR147C VPS68Q12016 184 aa2.23□□□□□ -2.05
SMD3YLR147C YBL112CQ3E7Y4 105 aa2.23□□□□□ -2.05
SMD3YLR147C KRE6P32486 720 aa2.22□□□□□ -2.05
SMD3YLR147C COY1P34237 679 aa2.22□□□□□ -2.05
SMD3YLR147C RPC25P35718 212 aa2.22□□□□□ -2.05
SMD3YLR147C VPS45P38932 577 aa2.22□□□□□ -2.05
SMD3YLR147C YJR146WP47174 117 aa2.22□□□□□ -2.05
SMD3YLR147C YPL039WQ03080 316 aa2.22□□□□□ -2.05
SMD3YLR147C TAF9Q05027 157 aa2.22□□□□□ -2.05
SMD3YLR147C RDS3Q06835 107 aaPredicted RBP2.22□□□□□ -2.05
SMD3YLR147C RPL26AP05743 127 aaKnown RBP2.21□□□□□ -2.06
SMD3YLR147C DPM1P14020 267 aaKnown RBP2.21□□□□□ -2.06
SMD3YLR147C RRT12P25381 491 aa2.21□□□□□ -2.06
SMD3YLR147C CAT2P32796 670 aaKnown RBP2.21□□□□□ -2.06
SMD3YLR147C PHO89P38361 574 aa2.21□□□□□ -2.06
SMD3YLR147C YGP1P38616 354 aaKnown RBP2.21□□□□□ -2.06
SMD3YLR147C RPE1P46969 238 aa2.21□□□□□ -2.06
SMD3YLR147C YJR141WP47172 347 aaPredicted RBP2.21□□□□□ -2.06
SMD3YLR147C RPL26BP53221 127 aaKnown RBP2.21□□□□□ -2.06
SMD3YLR147C FMP41P53889 259 aaKnown RBP2.21□□□□□ -2.06
SMD3YLR147C TOM40P23644 387 aaKnown RBP2.2□□□□□ -2.06
SMD3YLR147C ERG2P32352 222 aa2.2□□□□□ -2.06
SMD3YLR147C POP2P39008 433 aa2.2□□□□□ -2.06
SMD3YLR147C COG7P53195 279 aa2.2□□□□□ -2.06
SMD3YLR147C VPS60Q03390 229 aa2.2□□□□□ -2.06
SMD3YLR147C ECM18Q04623 453 aa2.2□□□□□ -2.06
SMD3YLR147C POM33Q12164 279 aa2.2□□□□□ -2.06
SMD3YLR147C MDY2Q12285 212 aa2.2□□□□□ -2.06
SMD3YLR147C HIS2P38635 335 aa2.19□□□□□ -2.06
SMD3YLR147C YIA6P40556 373 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms