RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W RPL6BP05739 176 aaKnown RBP4.39□□□□□ -1.71
LDB18YLL049W CDC31P06704 161 aaKnown RBP4.39□□□□□ -1.71
LDB18YLL049W YPK2P18961 677 aa4.39□□□□□ -1.71
LDB18YLL049W CLB4P24871 460 aa4.39□□□□□ -1.71
LDB18YLL049W PHO91P27514 894 aa4.39□□□□□ -1.71
LDB18YLL049W PRE4P30657 266 aa4.39□□□□□ -1.71
LDB18YLL049W GPX1P36014 167 aa4.39□□□□□ -1.71
LDB18YLL049W RCK1P38622 512 aa4.39□□□□□ -1.71
LDB18YLL049W ARN1P38731 627 aa4.39□□□□□ -1.71
LDB18YLL049W YHR035WP38769 630 aa4.39□□□□□ -1.71
LDB18YLL049W YHR097CP38809 366 aaKnown RBP4.39□□□□□ -1.71
LDB18YLL049W BUR6P40096 142 aa4.39□□□□□ -1.71
LDB18YLL049W SGN1P40561 250 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
LDB18YLL049W YDL186WP48568 277 aa4.39□□□□□ -1.71
LDB18YLL049W CUS2P53830 285 aaPredicted RBP4.39□□□□□ -1.71
LDB18YLL049W REX2P54964 269 aaKnown RBP4.39□□□□□ -1.71
LDB18YLL049W RSC9Q03124 581 aa4.39□□□□□ -1.71
LDB18YLL049W YML119WQ03208 357 aa4.39□□□□□ -1.71
LDB18YLL049W YDR102CQ03864 110 aa4.39□□□□□ -1.71
LDB18YLL049W SSQ1Q05931 657 aaPredicted RBP4.39□□□□□ -1.71
LDB18YLL049W SRL1Q08673 210 aa4.39□□□□□ -1.71
LDB18YLL049W YML003WP0CF16 290 aa4.38□□□□□ -1.71
LDB18YLL049W URE2P23202 354 aaKnown RBP4.38□□□□□ -1.71
LDB18YLL049W ARP2P32381 391 aaKnown RBP4.38□□□□□ -1.71
LDB18YLL049W MSN4P33749 630 aa4.38□□□□□ -1.71
LDB18YLL049W MRPL17P36528 281 aa4.38□□□□□ -1.71
LDB18YLL049W MRPL36P36531 177 aa4.38□□□□□ -1.71
LDB18YLL049W YBR032WP38223 100 aa4.38□□□□□ -1.71
LDB18YLL049W BIG1P38813 335 aa4.38□□□□□ -1.71
LDB18YLL049W FLO5P38894 1075 aa4.38□□□□□ -1.71
LDB18YLL049W PSD1P39006 500 aa4.38□□□□□ -1.71
LDB18YLL049W RBG1P39729 369 aa4.38□□□□□ -1.71
LDB18YLL049W RGI1P40043 161 aaPredicted RBP4.38□□□□□ -1.71
LDB18YLL049W NOP9P47077 666 aaKnown RBP4.38□□□□□ -1.71
LDB18YLL049W TWF1P53250 332 aa4.38□□□□□ -1.71
LDB18YLL049W NRG1Q03125 231 aa4.38□□□□□ -1.71
LDB18YLL049W PRP11Q07350 266 aaPredicted RBP4.38□□□□□ -1.71
LDB18YLL049W RPN6Q12377 434 aa4.38□□□□□ -1.71
LDB18YLL049W RTN2Q12443 393 aa4.38□□□□□ -1.71
LDB18YLL049W LAS17Q12446 633 aa4.38□□□□□ -1.71
LDB18YLL049W POL4P25615 582 aa4.37□□□□□ -1.71
LDB18YLL049W GLC7P32598 312 aaKnown RBP4.37□□□□□ -1.71
LDB18YLL049W MDL1P33310 695 aa4.37□□□□□ -1.71
LDB18YLL049W RPP1P38786 293 aa4.37□□□□□ -1.71
LDB18YLL049W MNN9P39107 395 aaKnown RBP4.37□□□□□ -1.71
LDB18YLL049W YEL068CP39977 110 aa4.37□□□□□ -1.71
LDB18YLL049W NOP16P40007 231 aaKnown RBP4.37□□□□□ -1.71
LDB18YLL049W YNR064CP53750 290 aa4.37□□□□□ -1.71
LDB18YLL049W YDR391CQ04170 232 aa4.37□□□□□ -1.71
LDB18YLL049W SYO1Q07395 620 aa4.37□□□□□ -1.71
LDB18YLL049W RXT3Q07458 294 aa4.37□□□□□ -1.71
LDB18YLL049W MED7Q08278 222 aa4.37□□□□□ -1.71
LDB18YLL049W POM34Q12445 299 aa4.37□□□□□ -1.71
LDB18YLL049W NOT5Q12514 560 aaPredicted RBP4.37□□□□□ -1.71
LDB18YLL049W TIM9O74700 87 aa4.36□□□□□ -1.71
LDB18YLL049W RPL39P04650 51 aa4.36□□□□□ -1.71
LDB18YLL049W ARO3P14843 370 aaKnown RBP4.36□□□□□ -1.71
LDB18YLL049W PET9P18239 318 aaKnown RBP4.36□□□□□ -1.71
LDB18YLL049W GPI18P38211 433 aa4.36□□□□□ -1.71
LDB18YLL049W GDI1P39958 451 aaKnown RBP4.36□□□□□ -1.71
LDB18YLL049W BRR6P53062 197 aa4.36□□□□□ -1.71
LDB18YLL049W YGL235WP53071 178 aa4.36□□□□□ -1.71
LDB18YLL049W GEP7P53171 287 aa4.36□□□□□ -1.71
LDB18YLL049W YDR387CQ04162 555 aa4.36□□□□□ -1.71
LDB18YLL049W YPR127WQ06494 345 aa4.36□□□□□ -1.71
LDB18YLL049W DIA2Q08496 732 aaPredicted RBP4.36□□□□□ -1.71
LDB18YLL049W YPL191CQ08930 360 aa4.36□□□□□ -1.71
LDB18YLL049W MF(ALPHA)1P01149 165 aa4.35□□□□□ -1.71
LDB18YLL049W ILV5P06168 395 aaKnown RBP4.35□□□□□ -1.71
LDB18YLL049W SNC1P31109 117 aa4.35□□□□□ -1.71
LDB18YLL049W TIF3P34167 436 aaKnown RBP4.35□□□□□ -1.71
LDB18YLL049W YCR041WP37265 110 aa4.35□□□□□ -1.71
LDB18YLL049W CDS1P38221 457 aa4.35□□□□□ -1.71
LDB18YLL049W SNM1P40993 198 aa4.35□□□□□ -1.71
LDB18YLL049W MPC1P53157 130 aaKnown RBP4.35□□□□□ -1.71
LDB18YLL049W SYF2P53277 215 aaPredicted RBP4.35□□□□□ -1.71
LDB18YLL049W VPS60Q03390 229 aa4.35□□□□□ -1.71
LDB18YLL049W ATG38Q05789 226 aaKnown RBP4.35□□□□□ -1.71
LDB18YLL049W BRE4Q07660 1125 aa4.35□□□□□ -1.71
LDB18YLL049W RRS1Q08746 203 aaKnown RBP4.35□□□□□ -1.71
LDB18YLL049W FCY22Q12119 530 aa4.35□□□□□ -1.71
LDB18YLL049W MCT1Q12283 360 aa4.35□□□□□ -1.71
LDB18YLL049W MRX4Q12467 430 aa4.35□□□□□ -1.71
LDB18YLL049W ARG3P05150 338 aa4.34□□□□□ -1.71
LDB18YLL049W DBP3P20447 523 aaKnown RBP4.34□□□□□ -1.71
LDB18YLL049W SAC1P32368 623 aaKnown RBP4.34□□□□□ -1.71
LDB18YLL049W ECM15P35195 104 aa4.34□□□□□ -1.71
LDB18YLL049W JEN1P36035 616 aa4.34□□□□□ -1.71
LDB18YLL049W TCM62P38228 572 aaKnown RBP4.34□□□□□ -1.71
LDB18YLL049W YBR096WP38256 230 aa4.34□□□□□ -1.71
LDB18YLL049W GET2P40056 285 aa4.34□□□□□ -1.71
LDB18YLL049W YIL166CP40445 542 aa4.34□□□□□ -1.71
LDB18YLL049W MET28P40573 187 aa4.34□□□□□ -1.71
LDB18YLL049W YDL183CP48569 320 aa4.34□□□□□ -1.71
LDB18YLL049W NUP57P48837 541 aa4.34□□□□□ -1.71
LDB18YLL049W SPC19Q03954 165 aa4.34□□□□□ -1.71
LDB18YLL049W KRE28Q04431 385 aa4.34□□□□□ -1.71
LDB18YLL049W SEC13Q04491 297 aaKnown RBP4.34□□□□□ -1.71
LDB18YLL049W SPO77Q06134 477 aa4.34□□□□□ -1.71
LDB18YLL049W MIM1Q08176 113 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms