RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C TRM11Q12463 433 aa6.42□□□□□ -1.38
HEL1YKR017C RHO2P06781 192 aa6.42□□□□□ -1.38
HEL1YKR017C FUN14P18411 198 aa6.42□□□□□ -1.38
HEL1YKR017C STP22P25604 385 aa6.42□□□□□ -1.38
HEL1YKR017C REC104P33323 182 aa6.42□□□□□ -1.38
HEL1YKR017C RER2P35196 286 aa6.42□□□□□ -1.38
HEL1YKR017C APL3P38065 1025 aa6.42□□□□□ -1.38
HEL1YKR017C QDR3P38227 689 aa6.42□□□□□ -1.38
HEL1YKR017C YEA6P39953 335 aa6.42□□□□□ -1.38
HEL1YKR017C DIM1P41819 318 aaKnown RBP6.42□□□□□ -1.38
HEL1YKR017C GLR1P41921 483 aaKnown RBP6.42□□□□□ -1.38
HEL1YKR017C ZAP1P47043 880 aa6.42□□□□□ -1.38
HEL1YKR017C GTR2P53290 341 aa6.42□□□□□ -1.38
HEL1YKR017C DAD3P69850 94 aa6.42□□□□□ -1.38
HEL1YKR017C OSH6Q02201 448 aa6.42□□□□□ -1.38
HEL1YKR017C CNL1Q06333 122 aa6.42□□□□□ -1.38
HEL1YKR017C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
HEL1YKR017C RDL1Q12305 139 aaKnown RBP6.42□□□□□ -1.38
HEL1YKR017C RDI1Q12434 202 aa6.42□□□□□ -1.38
HEL1YKR017C DDP1Q99321 188 aaKnown RBP6.42□□□□□ -1.38
HEL1YKR017C YBR085C-AO43137 85 aa6.41□□□□□ -1.38
HEL1YKR017C VAR1P02381 398 aa6.41□□□□□ -1.38
HEL1YKR017C HIP1P06775 603 aa6.41□□□□□ -1.38
HEL1YKR017C ACO1P19414 778 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
HEL1YKR017C MBR1P23493 339 aa6.41□□□□□ -1.38
HEL1YKR017C ELO2P25358 347 aa6.41□□□□□ -1.38
HEL1YKR017C SYN8P31377 255 aa6.41□□□□□ -1.38
HEL1YKR017C MRP49P32388 137 aa6.41□□□□□ -1.38
HEL1YKR017C SRB6P32570 121 aa6.41□□□□□ -1.38
HEL1YKR017C PAD1P33751 242 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
HEL1YKR017C FRE2P36033 711 aa6.41□□□□□ -1.38
HEL1YKR017C CHA4P43634 648 aa6.41□□□□□ -1.38
HEL1YKR017C GLO1P50107 326 aa6.41□□□□□ -1.38
HEL1YKR017C MRH4P53166 561 aa6.41□□□□□ -1.38
HEL1YKR017C MRPL22P53881 309 aa6.41□□□□□ -1.38
HEL1YKR017C IZH1Q03419 316 aa6.41□□□□□ -1.38
HEL1YKR017C YET2Q04210 160 aa6.41□□□□□ -1.38
HEL1YKR017C SEI1Q06058 285 aa6.41□□□□□ -1.38
HEL1YKR017C YLR407WQ06070 228 aa6.41□□□□□ -1.38
HEL1YKR017C NKP2Q06162 153 aa6.41□□□□□ -1.38
HEL1YKR017C ENT4Q07872 247 aa6.41□□□□□ -1.38
HEL1YKR017C TFC7Q12415 435 aa6.41□□□□□ -1.38
HEL1YKR017C UBA3Q99344 299 aa6.41□□□□□ -1.38
HEL1YKR017C COX5BP00425 151 aa6.4□□□□□ -1.38
HEL1YKR017C CTA1P15202 515 aa6.4□□□□□ -1.38
HEL1YKR017C UGA4P32837 571 aa6.4□□□□□ -1.38
HEL1YKR017C TIR2P33890 251 aa6.4□□□□□ -1.38
HEL1YKR017C OMA1P36163 345 aa6.4□□□□□ -1.38
HEL1YKR017C VBA2P38358 474 aaKnown RBP6.4□□□□□ -1.38
HEL1YKR017C MMS21P38632 267 aa6.4□□□□□ -1.38
HEL1YKR017C YHR035WP38769 630 aa6.4□□□□□ -1.38
HEL1YKR017C SSN3P39073 555 aa6.4□□□□□ -1.38
HEL1YKR017C BST1P43571 1029 aa6.4□□□□□ -1.38
HEL1YKR017C RPA43P46669 326 aa6.4□□□□□ -1.38
HEL1YKR017C MNN5P46982 586 aa6.4□□□□□ -1.38
HEL1YKR017C MGA1P53050 456 aa6.4□□□□□ -1.38
HEL1YKR017C NIF3P53081 288 aa6.4□□□□□ -1.38
HEL1YKR017C NSG2P53898 299 aa6.4□□□□□ -1.38
HEL1YKR017C YHM2Q04013 314 aa6.4□□□□□ -1.38
HEL1YKR017C TRM12Q04235 462 aa6.4□□□□□ -1.38
HEL1YKR017C RNH202Q05635 350 aa6.4□□□□□ -1.38
HEL1YKR017C SUE1Q06524 206 aa6.4□□□□□ -1.38
HEL1YKR017C GEP5Q12393 293 aa6.4□□□□□ -1.38
HEL1YKR017C AIM45Q12480 344 aaKnown RBP6.4□□□□□ -1.38
HEL1YKR017C HRP1Q99383 534 aaKnown RBP6.4□□□□□ -1.38
HEL1YKR017C IZH4Q99393 312 aa6.4□□□□□ -1.38
HEL1YKR017C SGE1P33335 543 aa6.39□□□□□ -1.39
HEL1YKR017C IRS4P36115 615 aaKnown RBP6.39□□□□□ -1.39
HEL1YKR017C ROT2P38138 954 aa6.39□□□□□ -1.39
HEL1YKR017C SRP68P38687 599 aaKnown RBP6.39□□□□□ -1.39
HEL1YKR017C BAT1P38891 393 aaKnown RBP6.39□□□□□ -1.39
HEL1YKR017C YIL060WP40519 144 aa6.39□□□□□ -1.39
HEL1YKR017C AAD14P42884 376 aa6.39□□□□□ -1.39
HEL1YKR017C STR3P53101 465 aaKnown RBP6.39□□□□□ -1.39
HEL1YKR017C HST3P53687 447 aa6.39□□□□□ -1.39
HEL1YKR017C YTH1Q06102 208 aaPredicted RBP6.39□□□□□ -1.39
HEL1YKR017C IPK1Q06667 281 aa6.39□□□□□ -1.39
HEL1YKR017C SHS1Q07657 551 aa6.39□□□□□ -1.39
HEL1YKR017C ALG6Q12001 544 aaKnown RBP6.39□□□□□ -1.39
HEL1YKR017C FRE8Q12209 686 aa6.39□□□□□ -1.39
HEL1YKR017C CDC4P07834 779 aa6.39□□□□□ -1.39
HEL1YKR017C ATP5P09457 212 aa6.39□□□□□ -1.39
HEL1YKR017C YFL068WP0CX99 160 aa6.39□□□□□ -1.39
HEL1YKR017C YLL066W-AP0CY00 160 aa6.39□□□□□ -1.39
HEL1YKR017C YLL067W-AP0CY01 160 aa6.39□□□□□ -1.39
HEL1YKR017C PUT3P25502 979 aaPredicted RBP6.39□□□□□ -1.39
HEL1YKR017C MRP20P32387 263 aa6.39□□□□□ -1.39
HEL1YKR017C YOR062CP36025 268 aa6.39□□□□□ -1.39
HEL1YKR017C SHE2P36068 246 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
HEL1YKR017C GMH1P36125 273 aa6.39□□□□□ -1.39
HEL1YKR017C MBA1P38300 278 aa6.39□□□□□ -1.39
HEL1YKR017C YAL037WP39728 267 aa6.39□□□□□ -1.39
HEL1YKR017C HXT13P39924 564 aa6.39□□□□□ -1.39
HEL1YKR017C SCD6P45978 349 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
HEL1YKR017C YJR012CP47087 207 aa6.39□□□□□ -1.39
HEL1YKR017C CPR7P47103 393 aa6.39□□□□□ -1.39
HEL1YKR017C YJR124CP47159 448 aa6.39□□□□□ -1.39
HEL1YKR017C YGL101WP53144 215 aa6.39□□□□□ -1.39
HEL1YKR017C IBD2P53892 351 aa6.39□□□□□ -1.39
HEL1YKR017C YPL067CQ02754 198 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms