RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W MGA1P53050 456 aa3.4□□□□□ -1.86
SPT6YGR116W SWC4P53201 476 aa3.4□□□□□ -1.86
SPT6YGR116W AAH1P53909 347 aa3.4□□□□□ -1.86
SPT6YGR116W APJ1P53940 528 aa3.4□□□□□ -1.86
SPT6YGR116W YNL034WP53963 612 aa3.4□□□□□ -1.86
SPT6YGR116W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.4□□□□□ -1.86not detected
SPT6YGR116W CRT10Q08226 957 aa3.4□□□□□ -1.86
SPT6YGR116W ATX2Q12067 313 aa3.4□□□□□ -1.86
SPT6YGR116W TFC7Q12415 435 aa3.4□□□□□ -1.86
SPT6YGR116W YLR146W-AQ2V2P1 62 aa3.4□□□□□ -1.86
SPT6YGR116W TY1A-DR4O74302 440 aa3.4□□□□□ -1.87
SPT6YGR116W LEU4P06208 619 aaKnown RBP3.4□□□□□ -1.87
SPT6YGR116W TY1A-AP0CX57 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-PR1P0CX58 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-ORP0CX59 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-PR2P0CX60 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-DR5P0CX65 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-ER2P0CX66 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-GR3P0CX67 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-LR1P0CX68 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-MR2P0CX69 440 aa3.4□□□□□ -1.87
SPT6YGR116W RSC6P25632 483 aa3.4□□□□□ -1.87
SPT6YGR116W TCD2P36101 447 aaKnown RBP3.4□□□□□ -1.87
SPT6YGR116W POP7P38291 140 aa3.4□□□□□ -1.87
SPT6YGR116W YHR127WP38833 243 aaKnown RBP3.4□□□□□ -1.87
SPT6YGR116W ICE2P40499 491 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-JR2P47099 440 aa3.4□□□□□ -1.87
SPT6YGR116W SOL1P50278 321 aa3.4□□□□□ -1.87
SPT6YGR116W YNR021WP53723 404 aaKnown RBP3.4□□□□□ -1.87
SPT6YGR116W CWC27Q02770 301 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-DR1Q03856 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-ML1Q04706 440 aaKnown RBP3.4□□□□□ -1.87
SPT6YGR116W TY1A-BRQ12217 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-NL2Q12470 440 aa3.4□□□□□ -1.87
SPT6YGR116W TY1A-GR2Q12485 440 aa3.4□□□□□ -1.87
SPT6YGR116W YKL033W-AQ86ZR7 236 aa3.4□□□□□ -1.87
SPT6YGR116W ADK1P07170 222 aaKnown RBP3.4□□□□□ -1.87
SPT6YGR116W MCK1P21965 375 aaKnown RBP3.4□□□□□ -1.87
SPT6YGR116W TRX3P25372 127 aa3.4□□□□□ -1.87
SPT6YGR116W BOS1P25385 244 aa3.4□□□□□ -1.87
SPT6YGR116W TIP1P27654 210 aaPredicted RBP3.4□□□□□ -1.87
SPT6YGR116W FAA1P30624 700 aaKnown RBP3.4□□□□□ -1.87
SPT6YGR116W DOA1P36037 715 aa3.4□□□□□ -1.87
SPT6YGR116W CBP4P37267 147 aa3.4□□□□□ -1.87
SPT6YGR116W TRS20P38334 175 aa3.4□□□□□ -1.87
SPT6YGR116W DBP8P38719 431 aa3.4□□□□□ -1.87
SPT6YGR116W JHD1P40034 492 aa3.4□□□□□ -1.87
SPT6YGR116W PAU15P40585 124 aa3.4□□□□□ -1.87
SPT6YGR116W AGX1P43567 385 aa3.4□□□□□ -1.87
SPT6YGR116W SFH5P47008 294 aa3.4□□□□□ -1.87
SPT6YGR116W YHC3P47040 408 aa3.4□□□□□ -1.87
SPT6YGR116W DAN1P47178 298 aa3.4□□□□□ -1.87
SPT6YGR116W UFD1P53044 361 aa3.4□□□□□ -1.87
SPT6YGR116W FPK1P53739 893 aa3.4□□□□□ -1.87
SPT6YGR116W ELA1P53861 379 aaPredicted RBP3.4□□□□□ -1.87
SPT6YGR116W MTQ1P53944 314 aa3.4□□□□□ -1.87
SPT6YGR116W CTF19Q02732 369 aa3.4□□□□□ -1.87
SPT6YGR116W CNE1P27825 502 aa3.39□□□□□ -1.87
SPT6YGR116W KAE1P36132 386 aa3.39□□□□□ -1.87
SPT6YGR116W YEL073CP39974 107 aa3.39□□□□□ -1.87
SPT6YGR116W MXR1P40029 184 aa3.39□□□□□ -1.87
SPT6YGR116W PIG2P40187 538 aa3.39□□□□□ -1.87
SPT6YGR116W YJR056CP47115 236 aa3.39□□□□□ -1.87
SPT6YGR116W YGR042WP53227 271 aa3.39□□□□□ -1.87
SPT6YGR116W RNH70P53331 553 aa3.39□□□□□ -1.87
SPT6YGR116W SMX3P54999 86 aaPredicted RBP3.39□□□□□ -1.87
SPT6YGR116W PUS9Q12069 462 aa3.39□□□□□ -1.87
SPT6YGR116W YOR114WQ12219 294 aa3.39□□□□□ -1.87
SPT6YGR116W PRS5Q12265 496 aaKnown RBP3.39□□□□□ -1.87
SPT6YGR116W GAL4P04386 881 aa3.39□□□□□ -1.87
SPT6YGR116W PPZ2P33329 710 aa3.39□□□□□ -1.87
SPT6YGR116W PHO11P35842 467 aa3.39□□□□□ -1.87
SPT6YGR116W PHO12P38693 467 aa3.39□□□□□ -1.87
SPT6YGR116W NEM1P38757 446 aa3.39□□□□□ -1.87
SPT6YGR116W SPC25P40014 221 aa3.39□□□□□ -1.87
SPT6YGR116W SYS1P41544 203 aa3.39□□□□□ -1.87
SPT6YGR116W QRI7P43122 407 aa3.39□□□□□ -1.87
SPT6YGR116W CIN2P46670 268 aa3.39□□□□□ -1.87
SPT6YGR116W MPA43P53583 542 aaPredicted RBP3.39□□□□□ -1.87
SPT6YGR116W RPL34AP87262 121 aaPredicted RBP3.39□□□□□ -1.87
SPT6YGR116W SAE3P89114 91 aa3.39□□□□□ -1.87
SPT6YGR116W MRP51Q02950 344 aa3.39□□□□□ -1.87
SPT6YGR116W YMR265CQ03508 461 aaKnown RBP3.39□□□□□ -1.87
SPT6YGR116W PHO5P00635 467 aa3.39□□□□□ -1.87
SPT6YGR116W STP22P25604 385 aa3.39□□□□□ -1.87
SPT6YGR116W LAC1P28496 418 aa3.39□□□□□ -1.87
SPT6YGR116W IRC22P40006 225 aa3.39□□□□□ -1.87
SPT6YGR116W FLX1P40464 311 aa3.39□□□□□ -1.87
SPT6YGR116W AVT7P40501 490 aa3.39□□□□□ -1.87
SPT6YGR116W COX16P47081 118 aa3.39□□□□□ -1.87
SPT6YGR116W IBA57P47158 497 aa3.39□□□□□ -1.87
SPT6YGR116W AMA1P50082 593 aa3.39□□□□□ -1.87
SPT6YGR116W YGL114WP53134 725 aa3.39□□□□□ -1.87
SPT6YGR116W KXD1P53158 218 aa3.39□□□□□ -1.87
SPT6YGR116W YIF1P53845 314 aaKnown RBP3.39□□□□□ -1.87
SPT6YGR116W RPN4Q03465 531 aa3.39□□□□□ -1.87
SPT6YGR116W RBS1Q05672 457 aaKnown RBP3.39□□□□□ -1.87
SPT6YGR116W CYK3Q07533 885 aa3.39□□□□□ -1.87
SPT6YGR116W PDH1Q12428 516 aaKnown RBP3.39□□□□□ -1.87
SPT6YGR116W SET6Q12529 373 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms