RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W YOR283WQ12040 230 aaKnown RBP5.47□□□□□ -1.53
RPN11YFR004W ERP4Q12450 207 aa5.47□□□□□ -1.53
RPN11YFR004W SFG1Q12507 346 aa5.47□□□□□ -1.53
RPN11YFR004W HTZ1Q12692 134 aaKnown RBP5.47□□□□□ -1.53
RPN11YFR004W CYC1P00044 109 aaPredicted RBP5.46□□□□□ -1.54
RPN11YFR004W PEP4P07267 405 aaKnown RBP5.46□□□□□ -1.54
RPN11YFR004W EXG1P23776 448 aaKnown RBP5.46□□□□□ -1.54
RPN11YFR004W FUN26P31381 517 aa5.46□□□□□ -1.54
RPN11YFR004W SDS22P36047 338 aa5.46□□□□□ -1.54
RPN11YFR004W SHE2P36068 246 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
RPN11YFR004W DTR1P38125 572 aa5.46□□□□□ -1.54
RPN11YFR004W VMA7P39111 118 aa5.46□□□□□ -1.54
RPN11YFR004W YEL068CP39977 110 aa5.46□□□□□ -1.54
RPN11YFR004W YER137CP40083 148 aaKnown RBP5.46□□□□□ -1.54
RPN11YFR004W BNA6P43619 295 aa5.46□□□□□ -1.54
RPN11YFR004W AAD10P47182 288 aa5.46□□□□□ -1.54
RPN11YFR004W OCA1P50946 238 aaPredicted RBP5.46□□□□□ -1.54
RPN11YFR004W MOT3P54785 490 aaKnown RBP5.46□□□□□ -1.54
RPN11YFR004W TPO3Q06451 622 aa5.46□□□□□ -1.54
RPN11YFR004W MRPL35Q06678 367 aa5.46□□□□□ -1.54
RPN11YFR004W SSK1Q07084 712 aa5.46□□□□□ -1.54
RPN11YFR004W YDL211CQ12121 372 aa5.46□□□□□ -1.54
RPN11YFR004W MTR10Q99189 972 aa5.46□□□□□ -1.54
RPN11YFR004W SPS2P08459 502 aa5.45□□□□□ -1.54
RPN11YFR004W SSA3P09435 649 aaKnown RBP5.45□□□□□ -1.54
RPN11YFR004W PET54P10834 293 aa5.45□□□□□ -1.54
RPN11YFR004W MCK1P21965 375 aaKnown RBP5.45□□□□□ -1.54
RPN11YFR004W RFA1P22336 621 aaKnown RBP5.45□□□□□ -1.54
RPN11YFR004W PRP28P23394 588 aa5.45□□□□□ -1.54
RPN11YFR004W PRE7P23724 241 aaKnown RBP5.45□□□□□ -1.54
RPN11YFR004W AHC2P25649 128 aa5.45□□□□□ -1.54
RPN11YFR004W FAA1P30624 700 aaKnown RBP5.45□□□□□ -1.54
RPN11YFR004W PUB1P32588 453 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
RPN11YFR004W YEF1P32622 495 aa5.45□□□□□ -1.54
RPN11YFR004W PTR2P32901 601 aa5.45□□□□□ -1.54
RPN11YFR004W MDL1P33310 695 aa5.45□□□□□ -1.54
RPN11YFR004W THI2P38141 450 aa5.45□□□□□ -1.54
RPN11YFR004W YIL152WP40455 235 aa5.45□□□□□ -1.54
RPN11YFR004W SDP1P40479 209 aa5.45□□□□□ -1.54
RPN11YFR004W YGR210CP42942 411 aa5.45□□□□□ -1.54
RPN11YFR004W VOA1P53262 265 aa5.45□□□□□ -1.54
RPN11YFR004W ERG13P54839 491 aaKnown RBP5.45□□□□□ -1.54
RPN11YFR004W NUP116Q02630 1113 aa5.45□□□□□ -1.54
RPN11YFR004W YMR315WQ04869 349 aaKnown RBP5.45□□□□□ -1.54
RPN11YFR004W RBS1Q05672 457 aaKnown RBP5.45□□□□□ -1.54
RPN11YFR004W ATG41Q12048 136 aa5.45□□□□□ -1.54
RPN11YFR004W FMP16Q12497 93 aa5.45□□□□□ -1.54
RPN11YFR004W YPR053CQ6Q5F3 151 aa5.45□□□□□ -1.54
RPN11YFR004W YGL041W-AP0C5N3 154 aa5.44□□□□□ -1.54
RPN11YFR004W NCP1P16603 691 aaKnown RBP5.44□□□□□ -1.54
RPN11YFR004W PHO80P20052 293 aa5.44□□□□□ -1.54
RPN11YFR004W YCR016WP25617 290 aaKnown RBP5.44□□□□□ -1.54
RPN11YFR004W ATG15P25641 520 aa5.44□□□□□ -1.54
RPN11YFR004W PRE4P30657 266 aa5.44□□□□□ -1.54
RPN11YFR004W PMT2P31382 759 aa5.44□□□□□ -1.54
RPN11YFR004W OAR1P35731 278 aa5.44□□□□□ -1.54
RPN11YFR004W SHM2P37291 469 aaKnown RBP5.44□□□□□ -1.54
RPN11YFR004W PAU24P38155 120 aa5.44□□□□□ -1.54
RPN11YFR004W HTD2P38790 280 aaKnown RBP5.44□□□□□ -1.54
RPN11YFR004W ALP1P38971 573 aa5.44□□□□□ -1.54
RPN11YFR004W FET3P38993 636 aa5.44□□□□□ -1.54
RPN11YFR004W MSS4P38994 779 aa5.44□□□□□ -1.54
RPN11YFR004W FMP52P40008 231 aa5.44□□□□□ -1.54
RPN11YFR004W RTT105P40063 208 aa5.44□□□□□ -1.54
RPN11YFR004W POP1P41812 875 aa5.44□□□□□ -1.54
RPN11YFR004W SEC16P48415 2195 aaKnown RBP5.44□□□□□ -1.54
RPN11YFR004W DOC1P53068 250 aa5.44□□□□□ -1.54
RPN11YFR004W YGL101WP53144 215 aa5.44□□□□□ -1.54
RPN11YFR004W TPC1P53257 314 aa5.44□□□□□ -1.54
RPN11YFR004W PAU12P53343 120 aa5.44□□□□□ -1.54
RPN11YFR004W DML1Q03652 475 aa5.44□□□□□ -1.54
RPN11YFR004W CRR1Q05790 422 aa5.44□□□□□ -1.54
RPN11YFR004W BAG7Q12128 409 aa5.44□□□□□ -1.54
RPN11YFR004W YDL177CQ12257 170 aa5.44□□□□□ -1.54
RPN11YFR004W GCN4P03069 281 aa5.43□□□□□ -1.54
RPN11YFR004W HIS3P06633 220 aa5.43□□□□□ -1.54
RPN11YFR004W ADK1P07170 222 aaKnown RBP5.43□□□□□ -1.54
RPN11YFR004W SEC12P11655 471 aa5.43□□□□□ -1.54
RPN11YFR004W STE12P13574 688 aa5.43□□□□□ -1.54
RPN11YFR004W DPM1P14020 267 aaKnown RBP5.43□□□□□ -1.54
RPN11YFR004W SEN2P16658 377 aa5.43□□□□□ -1.54
RPN11YFR004W AAC3P18238 307 aa5.43□□□□□ -1.54
RPN11YFR004W ERD2P18414 219 aa5.43□□□□□ -1.54
RPN11YFR004W BOS1P25385 244 aa5.43□□□□□ -1.54
RPN11YFR004W YMC1P32331 307 aa5.43□□□□□ -1.54
RPN11YFR004W ECM15P35195 104 aa5.43□□□□□ -1.54
RPN11YFR004W YKL063CP35725 167 aa5.43□□□□□ -1.54
RPN11YFR004W RPS27AP35997 82 aaKnown RBP5.43□□□□□ -1.54
RPN11YFR004W ANR2P36090 516 aaPredicted RBP5.43□□□□□ -1.54
RPN11YFR004W VPS51P36116 164 aa5.43□□□□□ -1.54
RPN11YFR004W PEX32P38292 413 aa5.43□□□□□ -1.54
RPN11YFR004W RPS27BP38711 82 aa5.43□□□□□ -1.54
RPN11YFR004W YHR122WP38829 231 aa5.43□□□□□ -1.54
RPN11YFR004W PTH1P38876 190 aaKnown RBP5.43□□□□□ -1.54
RPN11YFR004W HRB1P38922 454 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
RPN11YFR004W PHM8P40025 321 aa5.43□□□□□ -1.54
RPN11YFR004W CUP9P41817 306 aa5.43□□□□□ -1.54
RPN11YFR004W DPB11P47027 764 aaPredicted RBP5.43□□□□□ -1.54
RPN11YFR004W BNA1P47096 177 aa5.43□□□□□ -1.54
RPN11YFR004W MRPS16Q02608 121 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms