RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C UGA1P17649 471 aa1.13□□□□□ -2.23
RTR1YER139C YCR025CP25352 136 aa1.13□□□□□ -2.23
RTR1YER139C IMP3P32899 183 aaPredicted RBP1.13□□□□□ -2.23
RTR1YER139C RPC25P35718 212 aa1.13□□□□□ -2.23
RTR1YER139C YKL063CP35725 167 aa1.13□□□□□ -2.23
RTR1YER139C YKR032WP36127 104 aa1.13□□□□□ -2.23
RTR1YER139C MRPL3P36516 390 aa1.13□□□□□ -2.23
RTR1YER139C YBL081WP38180 368 aaKnown RBP1.13□□□□□ -2.23
RTR1YER139C SPT8P38915 602 aa1.13□□□□□ -2.23
RTR1YER139C SYS1P41544 203 aa1.13□□□□□ -2.23
RTR1YER139C MRX5P47007 382 aa1.13□□□□□ -2.23
RTR1YER139C COX16P47081 118 aa1.13□□□□□ -2.23
RTR1YER139C UFD1P53044 361 aa1.13□□□□□ -2.23
RTR1YER139C PNC1P53184 216 aaKnown RBP1.13□□□□□ -2.23
RTR1YER139C RSM27P53305 110 aa1.13□□□□□ -2.23
RTR1YER139C DBP6P53734 629 aaKnown RBP1.13□□□□□ -2.23
RTR1YER139C ERV25P54837 211 aaKnown RBP1.13□□□□□ -2.23
RTR1YER139C PRO2P54885 456 aaKnown RBP1.13□□□□□ -2.23
RTR1YER139C MIX17Q03667 156 aa1.13□□□□□ -2.23
RTR1YER139C PEX30Q06169 523 aa1.13□□□□□ -2.23
RTR1YER139C CUR1Q06469 252 aa1.13□□□□□ -2.23
RTR1YER139C TAZ1Q06510 381 aa1.13□□□□□ -2.23
RTR1YER139C BTS1Q12051 335 aa1.13□□□□□ -2.23
RTR1YER139C APC9Q12107 265 aa1.13□□□□□ -2.23
RTR1YER139C SIA1Q12212 622 aa1.13□□□□□ -2.23
RTR1YER139C YPR064WQ12492 139 aa1.13□□□□□ -2.23
RTR1YER139C YAL063C-AQ3E791 96 aa1.13□□□□□ -2.23
RTR1YER139C YOL163WP0CF20 169 aa1.12□□□□□ -2.23
RTR1YER139C KRE1P17260 313 aa1.12□□□□□ -2.23
RTR1YER139C RSA4P25382 515 aaKnown RBP1.12□□□□□ -2.23
RTR1YER139C RPL5P26321 297 aaKnown RBP1.12□□□□□ -2.23
RTR1YER139C ATG12P38316 186 aa1.12□□□□□ -2.23
RTR1YER139C YHL044WP38727 235 aa1.12□□□□□ -2.23
RTR1YER139C VAB2P40003 282 aa1.12□□□□□ -2.23
RTR1YER139C YER188WP40103 239 aa1.12□□□□□ -2.23
RTR1YER139C AVT7P40501 490 aa1.12□□□□□ -2.23
RTR1YER139C LIA1P47120 325 aaKnown RBP1.12□□□□□ -2.23
RTR1YER139C NBP1P52919 319 aaPredicted RBP1.12□□□□□ -2.23
RTR1YER139C MIG2P53035 382 aa1.12□□□□□ -2.23
RTR1YER139C YNL050CP53952 270 aa1.12□□□□□ -2.23
RTR1YER139C RGM1Q00453 211 aa1.12□□□□□ -2.23
RTR1YER139C MRS2Q01926 470 aa1.12□□□□□ -2.23
RTR1YER139C OSH6Q02201 448 aa1.12□□□□□ -2.23
RTR1YER139C RRN5Q02983 363 aa1.12□□□□□ -2.23
RTR1YER139C ATC1Q04005 294 aa1.12□□□□□ -2.23
RTR1YER139C NNT1Q05874 261 aa1.12□□□□□ -2.23
RTR1YER139C ASR1Q06834 288 aa1.12□□□□□ -2.23
RTR1YER139C ILV1P00927 576 aaKnown RBP1.11□□□□□ -2.23
RTR1YER139C SSA3P09435 649 aaKnown RBP1.11□□□□□ -2.23
RTR1YER139C MRP1P10662 321 aaKnown RBP1.11□□□□□ -2.23
RTR1YER139C PHO80P20052 293 aa1.11□□□□□ -2.23
RTR1YER139C DBP3P20447 523 aaKnown RBP1.11□□□□□ -2.23
RTR1YER139C YSR3P23501 404 aa1.11□□□□□ -2.23
RTR1YER139C COT1P32798 439 aa1.11□□□□□ -2.23
RTR1YER139C MBA1P38300 278 aa1.11□□□□□ -2.23
RTR1YER139C TCD1P38756 429 aa1.11□□□□□ -2.23
RTR1YER139C YER084WP40057 128 aa1.11□□□□□ -2.23
RTR1YER139C AVT6P40074 448 aa1.11□□□□□ -2.23
RTR1YER139C GDS1P41913 522 aa1.11□□□□□ -2.23
RTR1YER139C GTO1P48239 356 aa1.11□□□□□ -2.23
RTR1YER139C MND1P53102 219 aa1.11□□□□□ -2.23
RTR1YER139C BIO4P53630 237 aa1.11□□□□□ -2.23
RTR1YER139C SWT21P53873 357 aaPredicted RBP1.11□□□□□ -2.23
RTR1YER139C SPO19Q03029 223 aa1.11□□□□□ -2.23
RTR1YER139C YMR209CQ03648 457 aa1.11□□□□□ -2.23
RTR1YER139C DPP1Q05521 289 aa1.11□□□□□ -2.23
RTR1YER139C RRG8Q06109 277 aa1.11□□□□□ -2.23
RTR1YER139C GPN3Q06543 272 aa1.11□□□□□ -2.23
RTR1YER139C VAC14Q06708 880 aa1.11□□□□□ -2.23
RTR1YER139C CLP1Q08685 445 aaPredicted RBP1.11□□□□□ -2.23
RTR1YER139C POM33Q12164 279 aa1.11□□□□□ -2.23
RTR1YER139C YOL107WQ12239 342 aa1.11□□□□□ -2.23
RTR1YER139C TIM22Q12328 207 aa1.11□□□□□ -2.23
RTR1YER139C MED4Q12343 284 aa1.11□□□□□ -2.23
RTR1YER139C TDH2P00358 332 aaKnown RBP1.1□□□□□ -2.23
RTR1YER139C OSM1P21375 501 aaKnown RBP1.1□□□□□ -2.23
RTR1YER139C GPI12P23797 304 aa1.1□□□□□ -2.23
RTR1YER139C AEP1P32493 518 aa1.1□□□□□ -2.23
RTR1YER139C SRB4P32569 687 aa1.1□□□□□ -2.23
RTR1YER139C YKL070WP36087 169 aa1.1□□□□□ -2.23
RTR1YER139C HIS2P38635 335 aa1.1□□□□□ -2.23
RTR1YER139C YHI9P38765 294 aa1.1□□□□□ -2.23
RTR1YER139C MED6P38782 295 aa1.1□□□□□ -2.23
RTR1YER139C SEN34P39707 275 aa1.1□□□□□ -2.23
RTR1YER139C YIA6P40556 373 aa1.1□□□□□ -2.23
RTR1YER139C CDC40P40968 455 aaPredicted RBP1.1□□□□□ -2.23
RTR1YER139C YPT32P51996 222 aaKnown RBP1.1□□□□□ -2.23
RTR1YER139C COG7P53195 279 aa1.1□□□□□ -2.23
RTR1YER139C YNL260CP53846 198 aa1.1□□□□□ -2.23
RTR1YER139C ALG9P53868 555 aaKnown RBP1.1□□□□□ -2.23
RTR1YER139C YPL077CQ02831 240 aa1.1□□□□□ -2.23
RTR1YER139C ERV41Q04651 352 aa1.1□□□□□ -2.23
RTR1YER139C KAP95Q06142 861 aaKnown RBP1.1□□□□□ -2.23
RTR1YER139C BCP1Q06338 283 aa1.1□□□□□ -2.23
RTR1YER139C CDD1Q06549 142 aa1.1□□□□□ -2.23
RTR1YER139C FEX1Q08913 375 aa1.1□□□□□ -2.23
RTR1YER139C FEX2Q08991 375 aa1.1□□□□□ -2.23
RTR1YER139C PRR2Q12310 699 aa1.1□□□□□ -2.23
RTR1YER139C SSK22P25390 1331 aaPredicted RBP1.1□□□□□ -2.23
RTR1YER139C RSR1P13856 272 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms