RNA–Protein interactions for RNA: YDL172C

YDL172C, Transcript of Dubious open reading frame, yeast

Gene YDL172C, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL172C	YDL172C	YNR062C	P53748	327 aa		4.81	□□□□□ -1.64
YDL172C	YDL172C	YPR196W	Q06595	470 aa		4.81	□□□□□ -1.64
YDL172C	YDL172C	ULA1	Q12059	462 aa		4.81	□□□□□ -1.64
YDL172C	YDL172C	SFM1	Q12314	213 aa		4.81	□□□□□ -1.64
YDL172C	YDL172C	RAD52	P06778	471 aa	Known RBP	4.8	□□□□□ -1.64
YDL172C	YDL172C	ACH1	P32316	526 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	YME2	P32843	850 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	YBR032W	P38223	100 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	TCM62	P38228	572 aa	Known RBP	4.8	□□□□□ -1.64
YDL172C	YDL172C	YHR035W	P38769	630 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	SWD1	P39706	426 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	FLX1	P40464	311 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	PFS2	P42841	465 aa	Known RBP	4.8	□□□□□ -1.64
YDL172C	YDL172C	CCT7	P42943	550 aa	Known RBP	4.8	□□□□□ -1.64
YDL172C	YDL172C	YNL181W	P53878	407 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	YKR011C	Q02209	353 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	LGE1	Q02796	332 aa	Known RBP	4.8	□□□□□ -1.64
YDL172C	YDL172C	GTB1	Q04924	702 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	FAR8	Q05040	523 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	MFG1	Q07684	458 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	RRT8	Q08219	342 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	YLR108C	Q12259	485 aa		4.8	□□□□□ -1.64
YDL172C	YDL172C	RAD7	P06779	565 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	RPC19	P28000	142 aa	Known RBP	4.79	□□□□□ -1.64
YDL172C	YDL172C	TCA17	P32613	152 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	HBS1	P32769	611 aa	Known RBP	4.79	□□□□□ -1.64
YDL172C	YDL172C	TOA1	P32773	286 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	NIC96	P34077	839 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	YCR041W	P37265	110 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	ARO9	P38840	513 aa	Predicted RBP	4.79	□□□□□ -1.64
YDL172C	YDL172C	PHO90	P39535	881 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	YEL068C	P39977	110 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	MDE1	P47095	244 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	PUS4	P48567	403 aa	Known RBP	4.79	□□□□□ -1.64
YDL172C	YDL172C	SYF2	P53277	215 aa	Predicted RBP	4.79	□□□□□ -1.64
YDL172C	YDL172C	GTR1	Q00582	310 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	APM1	Q00776	475 aa	Predicted RBP	4.79	□□□□□ -1.64
YDL172C	YDL172C	SEC13	Q04491	297 aa	Known RBP	4.79	□□□□□ -1.64
YDL172C	YDL172C	ARO10	Q06408	635 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	VPS36	Q06696	566 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	HRT1	Q08273	121 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	DIA2	Q08496	732 aa	Predicted RBP	4.79	□□□□□ -1.64
YDL172C	YDL172C	APC2	Q12440	853 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	MRX4	Q12467	430 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	YOL087C	Q99247	1116 aa		4.79	□□□□□ -1.64
YDL172C	YDL172C	MSW1	P04803	379 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	MRPS28	P21771	286 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	BUD5	P25300	642 aa	Predicted RBP	4.78	□□□□□ -1.64
YDL172C	YDL172C	PPA2	P28239	310 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	DGR2	P32330	852 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	VPH2	P32341	215 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	PRP19	P32523	503 aa	Known RBP	4.78	□□□□□ -1.64
YDL172C	YDL172C	MTC7	P32633	139 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	NUF2	P33895	451 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	FLO5	P38894	1075 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	YER184C	P39961	794 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	PMT6	P42934	759 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	UFD1	P53044	361 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	MSS11	Q03825	758 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	RAD33	Q04231	177 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	SNT309	Q06091	175 aa	Predicted RBP	4.78	□□□□□ -1.64
YDL172C	YDL172C	DBP9	Q06218	594 aa	Known RBP	4.78	□□□□□ -1.64
YDL172C	YDL172C	YDL009C	Q12210	107 aa		4.78	□□□□□ -1.64
YDL172C	YDL172C	YMR085W	P0CF18	432 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	DSF1	P0CX08	502 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	YNR073C	P0CX09	502 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	EXO70	P19658	623 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	PRP28	P23394	588 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
YDL172C	YDL172C	TIF3	P34167	436 aa	Known RBP	4.77	□□□□□ -1.65
YDL172C	YDL172C	YBR241C	P38142	488 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	NAS2	P40555	220 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	NSA1	P53136	463 aa	Predicted RBP	4.77	□□□□□ -1.65
YDL172C	YDL172C	MEP3	P53390	489 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	TPS1	Q00764	495 aa	Known RBP	4.77	□□□□□ -1.65
YDL172C	YDL172C	YDC1	Q02896	317 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	BNA7	Q04066	261 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	SNO4	Q04902	237 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	RNH202	Q05635	350 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	HSP33	Q08914	237 aa	Known RBP	4.77	□□□□□ -1.65
YDL172C	YDL172C	HSP32	Q08992	237 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	NCA2	Q12374	616 aa		4.77	□□□□□ -1.65
YDL172C	YDL172C	THP2	O13539	261 aa	Known RBP	4.76	□□□□□ -1.65
YDL172C	YDL172C	NAM2	P11325	894 aa		4.76	□□□□□ -1.65
YDL172C	YDL172C	YCR100C	P25606	316 aa		4.76	□□□□□ -1.65
YDL172C	YDL172C	SUA7	P29055	345 aa	Predicted RBP	4.76	□□□□□ -1.65
YDL172C	YDL172C	ARC19	P33204	171 aa	Known RBP	4.76	□□□□□ -1.65
YDL172C	YDL172C	IRC5	P43610	853 aa		4.76	□□□□□ -1.65
YDL172C	YDL172C	IDS2	P46958	469 aa		4.76	□□□□□ -1.65
YDL172C	YDL172C	BNA1	P47096	177 aa		4.76	□□□□□ -1.65
YDL172C	YDL172C	IMD4	P50094	524 aa	Known RBP	4.76	□□□□□ -1.65
YDL172C	YDL172C	COG2	P53271	262 aa		4.76	□□□□□ -1.65
YDL172C	YDL172C	DML1	Q03652	475 aa		4.76	□□□□□ -1.65
YDL172C	YDL172C	SKI7	Q08491	747 aa	Predicted RBP	4.76	□□□□□ -1.65
YDL172C	YDL172C	TPK2	P06245	380 aa		4.75	□□□□□ -1.65
YDL172C	YDL172C	RHB1	P25378	209 aa		4.75	□□□□□ -1.65
YDL172C	YDL172C	SSE2	P32590	693 aa	Known RBP	4.75	□□□□□ -1.65
YDL172C	YDL172C	MTW1	P39731	289 aa		4.75	□□□□□ -1.65
YDL172C	YDL172C	SLM1	P40485	686 aa		4.75	□□□□□ -1.65
YDL172C	YDL172C	GNP1	P48813	663 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms