RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W DMA2P53924 522 aa7.21□□□□□ -1.25
ABP1YCR088W ARG5,6Q01217 863 aa7.21□□□□□ -1.25
ABP1YCR088W LAP3Q01532 483 aaKnown RBP RIP-Chip data7.21□□□□□ -1.25not detected
ABP1YCR088W YPL113CQ02961 396 aa7.21□□□□□ -1.25
ABP1YCR088W YPR127WQ06494 345 aa7.21□□□□□ -1.25
ABP1YCR088W HRT1Q08273 121 aa7.21□□□□□ -1.25
ABP1YCR088W BTS1Q12051 335 aa7.21□□□□□ -1.25
ABP1YCR088W FSH3Q99369 266 aa7.21□□□□□ -1.25
ABP1YCR088W REP2P03872 296 aa7.2□□□□□ -1.26
ABP1YCR088W PHO2P07269 559 aa7.2□□□□□ -1.26
ABP1YCR088W MRPL33P20084 86 aa7.2□□□□□ -1.26
ABP1YCR088W CPR2P23285 205 aa7.2□□□□□ -1.26
ABP1YCR088W PPH21P23594 369 aa7.2□□□□□ -1.26
ABP1YCR088W PDC2P32896 925 aa7.2□□□□□ -1.26
ABP1YCR088W KAE1P36132 386 aa7.2□□□□□ -1.26
ABP1YCR088W SDS24P38314 527 aa7.2□□□□□ -1.26
ABP1YCR088W TRR2P38816 342 aa7.2□□□□□ -1.26
ABP1YCR088W FAA3P39002 694 aa7.2□□□□□ -1.26
ABP1YCR088W SSO2P39926 295 aa7.2□□□□□ -1.26
ABP1YCR088W LRO1P40345 661 aa7.2□□□□□ -1.26
ABP1YCR088W NAS2P40555 220 aa7.2□□□□□ -1.26
ABP1YCR088W GLR1P41921 483 aaKnown RBP7.2□□□□□ -1.26
ABP1YCR088W SLS1P42900 643 aa7.2□□□□□ -1.26
ABP1YCR088W OTU1P43558 301 aa7.2□□□□□ -1.26
ABP1YCR088W YHC3P47040 408 aa7.2□□□□□ -1.26
ABP1YCR088W YGL159WP53110 370 aa7.2□□□□□ -1.26
ABP1YCR088W OKP1P53298 406 aa7.2□□□□□ -1.26
ABP1YCR088W SOK2P53438 785 aaPredicted RBP7.2□□□□□ -1.26
ABP1YCR088W DCS1Q06151 350 aa7.2□□□□□ -1.26
ABP1YCR088W ANT1Q06497 328 aa7.2□□□□□ -1.26
ABP1YCR088W YJR112W-AQ3E743 109 aa7.2□□□□□ -1.26
ABP1YCR088W RPP1AP05318 106 aaPredicted RBP7.2□□□□□ -1.26
ABP1YCR088W YNL208WP40159 199 aaKnown RBP7.2□□□□□ -1.26
ABP1YCR088W YGL204CP53089 101 aa7.2□□□□□ -1.26
ABP1YCR088W GTF1P53260 183 aaPredicted RBP7.2□□□□□ -1.26
ABP1YCR088W RHO3Q00245 231 aaKnown RBP7.2□□□□□ -1.26
ABP1YCR088W GRC3Q07845 632 aa7.2□□□□□ -1.26
ABP1YCR088W YPL272CQ08984 517 aa7.2□□□□□ -1.26
ABP1YCR088W RTC5Q12108 567 aaKnown RBP7.2□□□□□ -1.26
ABP1YCR088W FUR4P05316 633 aaKnown RBP7.19□□□□□ -1.26
ABP1YCR088W MTC7P32633 139 aa7.19□□□□□ -1.26
ABP1YCR088W FLO10P36170 1169 aa7.19□□□□□ -1.26
ABP1YCR088W CHK1P38147 527 aa7.19□□□□□ -1.26
ABP1YCR088W NSG1P38837 291 aa7.19□□□□□ -1.26
ABP1YCR088W YIL108WP40483 696 aaKnown RBP7.19□□□□□ -1.26
ABP1YCR088W YIP4P53093 235 aa7.19□□□□□ -1.26
ABP1YCR088W YNR014WP53719 212 aa7.19□□□□□ -1.26
ABP1YCR088W YPR084WQ06821 456 aa7.19□□□□□ -1.26
ABP1YCR088W YPR091CQ06833 770 aa7.19□□□□□ -1.26
ABP1YCR088W RDR1Q08904 546 aa7.19□□□□□ -1.26
ABP1YCR088W RTK1Q12100 620 aaPredicted RBP7.19□□□□□ -1.26
ABP1YCR088W TRM13Q12383 476 aa7.19□□□□□ -1.26
ABP1YCR088W MPD2Q99316 277 aa7.19□□□□□ -1.26
ABP1YCR088W FAB1P34756 2278 aa7.19□□□□□ -1.26
ABP1YCR088W TDH2P00358 332 aaKnown RBP7.18□□□□□ -1.26
ABP1YCR088W STE50P25344 346 aa7.18□□□□□ -1.26
ABP1YCR088W LAG1P38703 411 aa7.18□□□□□ -1.26
ABP1YCR088W UTP25P40498 721 aaKnown RBP7.18□□□□□ -1.26
ABP1YCR088W LOH1P47055 219 aa7.18□□□□□ -1.26
ABP1YCR088W RSM27P53305 110 aa7.18□□□□□ -1.26
ABP1YCR088W YNR061CP53747 219 aa7.18□□□□□ -1.26
ABP1YCR088W HEM25Q07534 307 aa7.18□□□□□ -1.26
ABP1YCR088W YOR385WQ08909 290 aa7.18□□□□□ -1.26
ABP1YCR088W RPL20AP0CX23 172 aaKnown RBP7.18□□□□□ -1.26
ABP1YCR088W RPL20BP0CX24 172 aaPredicted RBP7.18□□□□□ -1.26
ABP1YCR088W HOM3P10869 527 aa7.18□□□□□ -1.26
ABP1YCR088W GAS1P22146 559 aaKnown RBP7.18□□□□□ -1.26
ABP1YCR088W VAM7P32912 316 aa7.18□□□□□ -1.26
ABP1YCR088W PAC1P39946 494 aaKnown RBP7.18□□□□□ -1.26
ABP1YCR088W BMT5P40493 336 aa7.18□□□□□ -1.26
ABP1YCR088W SNN1P48232 102 aa7.18□□□□□ -1.26
ABP1YCR088W COQ5P49017 307 aa7.18□□□□□ -1.26
ABP1YCR088W ODC1Q03028 310 aa7.18□□□□□ -1.26
ABP1YCR088W SMA2Q04658 369 aa7.18□□□□□ -1.26
ABP1YCR088W LEU9Q12166 604 aaKnown RBP7.18□□□□□ -1.26
ABP1YCR088W GLO4Q12320 285 aa7.18□□□□□ -1.26
ABP1YCR088W AHC1Q12433 566 aa7.18□□□□□ -1.26
ABP1YCR088W AIR2Q12476 344 aaKnown RBP7.18□□□□□ -1.26
ABP1YCR088W ODC2Q99297 307 aa7.18□□□□□ -1.26
ABP1YCR088W AI1P03875 834 aa7.17□□□□□ -1.26
ABP1YCR088W GCD1P09032 578 aaPredicted RBP7.17□□□□□ -1.26
ABP1YCR088W ARO3P14843 370 aaKnown RBP7.17□□□□□ -1.26
ABP1YCR088W TIP1P27654 210 aaPredicted RBP7.17□□□□□ -1.26
ABP1YCR088W DBF20P32328 564 aa7.17□□□□□ -1.26
ABP1YCR088W YKL071WP36086 256 aa7.17□□□□□ -1.26
ABP1YCR088W BET3P36149 193 aa7.17□□□□□ -1.26
ABP1YCR088W SDH8P38345 138 aa7.17□□□□□ -1.26
ABP1YCR088W ARO9P38840 513 aaPredicted RBP7.17□□□□□ -1.26
ABP1YCR088W SWM2P40342 146 aa7.17□□□□□ -1.26
ABP1YCR088W OGG1P53397 376 aaPredicted RBP7.17□□□□□ -1.26
ABP1YCR088W SRO7Q12038 1033 aa7.17□□□□□ -1.26
ABP1YCR088W ORT1Q12375 292 aa7.17□□□□□ -1.26
ABP1YCR088W RPS13P05756 151 aaKnown RBP7.16□□□□□ -1.26
ABP1YCR088W SGA1P08019 549 aa7.16□□□□□ -1.26
ABP1YCR088W COQ2P32378 372 aa7.16□□□□□ -1.26
ABP1YCR088W SAP30P38429 201 aa7.16□□□□□ -1.26
ABP1YCR088W YAL037WP39728 267 aa7.16□□□□□ -1.26
ABP1YCR088W PHO23P50947 330 aa7.16□□□□□ -1.26
ABP1YCR088W YGR250CP53316 781 aaKnown RBP7.16□□□□□ -1.26
ABP1YCR088W RNH70P53331 553 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms