RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C DED81P38707 554 aaKnown RBP2.47□□□□□ -2.01
SHG1YBR258C PRP39P39682 629 aaKnown RBP2.47□□□□□ -2.01
SHG1YBR258C PEX22P39718 180 aa2.47□□□□□ -2.01
SHG1YBR258C FAR10Q06001 478 aa2.47□□□□□ -2.01
SHG1YBR258C STE23Q06010 1027 aa2.47□□□□□ -2.01
SHG1YBR258C ARR1Q06596 294 aa2.47□□□□□ -2.01
SHG1YBR258C RPN6Q12377 434 aa2.47□□□□□ -2.01
SHG1YBR258C SPO24Q3E752 67 aa2.47□□□□□ -2.01
SHG1YBR258C YOL085CQ99345 113 aa2.47□□□□□ -2.01
SHG1YBR258C COT1P32798 439 aa2.46□□□□□ -2.02
SHG1YBR258C YNL320WP42840 284 aa2.46□□□□□ -2.02
SHG1YBR258C NAS6P50086 228 aa2.46□□□□□ -2.02
SHG1YBR258C YGL114WP53134 725 aa2.46□□□□□ -2.02
SHG1YBR258C CDH1P53197 566 aa2.46□□□□□ -2.02
SHG1YBR258C YNL040WP53960 456 aaPredicted RBP2.46□□□□□ -2.02
SHG1YBR258C SED5Q01590 340 aa2.46□□□□□ -2.02
SHG1YBR258C RMI1Q02685 241 aa2.46□□□□□ -2.02
SHG1YBR258C VPS20Q04272 221 aa2.46□□□□□ -2.02
SHG1YBR258C GAS2Q06135 555 aa2.46□□□□□ -2.02
SHG1YBR258C SMD2Q06217 110 aaKnown RBP2.46□□□□□ -2.02
SHG1YBR258C PER33Q12144 273 aa2.46□□□□□ -2.02
SHG1YBR258C PDR18P53756 1333 aa2.45□□□□□ -2.02
SHG1YBR258C SAL1D6W196 494 aa2.45□□□□□ -2.02
SHG1YBR258C YLL053CP0CD98 152 aa2.45□□□□□ -2.02
SHG1YBR258C GAL3P13045 520 aa2.45□□□□□ -2.02
SHG1YBR258C PDC2P32896 925 aa2.45□□□□□ -2.02
SHG1YBR258C TIP20P33891 701 aa2.45□□□□□ -2.02
SHG1YBR258C EFM1P38732 585 aa2.45□□□□□ -2.02
SHG1YBR258C GAA1P39012 614 aa2.45□□□□□ -2.02
SHG1YBR258C UFE1P41834 346 aa2.45□□□□□ -2.02
SHG1YBR258C NBP35P52920 328 aa2.45□□□□□ -2.02
SHG1YBR258C RPL21AQ02753 160 aaKnown RBP2.45□□□□□ -2.02
SHG1YBR258C YDR115WQ04598 105 aa2.45□□□□□ -2.02
SHG1YBR258C YDL211CQ12121 372 aa2.45□□□□□ -2.02
SHG1YBR258C YDL012CQ12489 107 aa2.45□□□□□ -2.02
SHG1YBR258C RPL21BQ12672 160 aaKnown RBP2.45□□□□□ -2.02
SHG1YBR258C BLM10P43583 2143 aa2.45□□□□□ -2.02
SHG1YBR258C CDC37P06101 506 aaKnown RBP2.44□□□□□ -2.02
SHG1YBR258C ASP3-2P0CX77 362 aa2.44□□□□□ -2.02
SHG1YBR258C ASP3-3P0CX78 362 aa2.44□□□□□ -2.02
SHG1YBR258C ASP3-4P0CX79 362 aa2.44□□□□□ -2.02
SHG1YBR258C ASP3-1P0CZ17 362 aa2.44□□□□□ -2.02
SHG1YBR258C PPH21P23594 369 aa2.44□□□□□ -2.02
SHG1YBR258C ACB1P31787 87 aa2.44□□□□□ -2.02
SHG1YBR258C SGE1P33335 543 aa2.44□□□□□ -2.02
SHG1YBR258C SMP1P38128 452 aa2.44□□□□□ -2.02
SHG1YBR258C YBR241CP38142 488 aa2.44□□□□□ -2.02
SHG1YBR258C IML3P38265 245 aa2.44□□□□□ -2.02
SHG1YBR258C FHL1P39521 936 aa2.44□□□□□ -2.02
SHG1YBR258C INA22P40576 216 aa2.44□□□□□ -2.02
SHG1YBR258C TAF6P53040 516 aa2.44□□□□□ -2.02
SHG1YBR258C EMC4P53073 190 aa2.44□□□□□ -2.02
SHG1YBR258C RVB1Q03940 463 aaKnown RBP2.44□□□□□ -2.02
SHG1YBR258C ECM11Q04110 302 aa2.44□□□□□ -2.02
SHG1YBR258C DDC1Q08949 612 aa2.44□□□□□ -2.02
SHG1YBR258C REX3Q12090 404 aa2.44□□□□□ -2.02
SHG1YBR258C RAX2Q12465 1220 aa2.44□□□□□ -2.02
SHG1YBR258C TRX1P22217 103 aaKnown RBP2.43□□□□□ -2.02
SHG1YBR258C RBK1P25332 333 aa2.43□□□□□ -2.02
SHG1YBR258C PET18P25362 215 aa2.43□□□□□ -2.02
SHG1YBR258C SPS19P32573 292 aaKnown RBP2.43□□□□□ -2.02
SHG1YBR258C SUR1P33300 382 aa2.43□□□□□ -2.02
SHG1YBR258C TAF14P35189 244 aa2.43□□□□□ -2.02
SHG1YBR258C DTR1P38125 572 aa2.43□□□□□ -2.02
SHG1YBR258C YDR089WP38966 869 aa2.43□□□□□ -2.02
SHG1YBR258C SSO2P39926 295 aa2.43□□□□□ -2.02
SHG1YBR258C SHQ1P40486 507 aaPredicted RBP2.43□□□□□ -2.02
SHG1YBR258C LOC1P43586 204 aaPredicted RBP2.43□□□□□ -2.02
SHG1YBR258C COG7P53195 279 aa2.43□□□□□ -2.02
SHG1YBR258C PXR1P53335 271 aaPredicted RBP2.43□□□□□ -2.02
SHG1YBR258C MRX11Q03079 207 aa2.43□□□□□ -2.02
SHG1YBR258C MCH1Q07376 486 aa2.43□□□□□ -2.02
SHG1YBR258C ATG10Q07879 167 aa2.43□□□□□ -2.02
SHG1YBR258C YLR012CQ07927 99 aa2.43□□□□□ -2.02
SHG1YBR258C YDR018CQ12185 396 aa2.43□□□□□ -2.02
SHG1YBR258C PRM4Q12498 284 aa2.43□□□□□ -2.02
SHG1YBR258C REP1P03871 373 aa2.42□□□□□ -2.02
SHG1YBR258C URA10P30402 227 aa2.42□□□□□ -2.02
SHG1YBR258C PCH2P38126 564 aa2.42□□□□□ -2.02
SHG1YBR258C RCK1P38622 512 aa2.42□□□□□ -2.02
SHG1YBR258C CDC40P40968 455 aaPredicted RBP2.42□□□□□ -2.02
SHG1YBR258C STB1P42845 420 aa2.42□□□□□ -2.02
SHG1YBR258C PMT4P46971 762 aa2.42□□□□□ -2.02
SHG1YBR258C YGR067CP53243 804 aa2.42□□□□□ -2.02
SHG1YBR258C NOP13P53883 403 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SHG1YBR258C CLP1Q08685 445 aaPredicted RBP2.42□□□□□ -2.02
SHG1YBR258C MMT2Q08970 484 aa2.42□□□□□ -2.02
SHG1YBR258C CBP2P03874 630 aaPredicted RBP2.41□□□□□ -2.02
SHG1YBR258C TCP1P12612 559 aaKnown RBP2.41□□□□□ -2.02
SHG1YBR258C PUT4P15380 627 aa2.41□□□□□ -2.02
SHG1YBR258C BGL2P15703 313 aaKnown RBP2.41□□□□□ -2.02
SHG1YBR258C POL30P15873 258 aaKnown RBP2.41□□□□□ -2.02
SHG1YBR258C EPT1P22140 391 aa2.41□□□□□ -2.02
SHG1YBR258C VMA5P31412 392 aaKnown RBP2.41□□□□□ -2.02
SHG1YBR258C EBP2P36049 427 aaKnown RBP2.41□□□□□ -2.02
SHG1YBR258C YKL071WP36086 256 aa2.41□□□□□ -2.02
SHG1YBR258C ECM34P38728 170 aa2.41□□□□□ -2.02
SHG1YBR258C GGC1P38988 300 aa2.41□□□□□ -2.02
SHG1YBR258C YFL012WP43580 148 aa2.41□□□□□ -2.02
SHG1YBR258C YFR018CP43599 363 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms